Sus scrofa (pig): 100514133
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Entry
100514133 CDS
T01009
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100514133 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100514133 (XRCC5)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
100514133 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
PilJ_C
Motif
Other DBs
NCBI-GeneID:
100514133
NCBI-ProteinID:
XP_003133697
Ensembl:
ENSSSCG00000016177
LinkDB
All DBs
Position
15:118354943..118451974
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AA seq
733 aa
AA seq
DB search
MARWGNKAAVVLCVDVGFAMSNSFPGEESPFELAKKVITMFVQRQVFAESKDEIALVLFG
TDGTENALAGKDQYQNITVHRHLKLPDFDLLEDIESKIQPGSQQADFLDALIVCMDLIQQ
ETIGKKFEKRHIEVFTDLSSPFSKDQLDIIIHNLKKSGISLQFFLPFPVGKEDGTGDRGD
SSLRPDHHGPSFPLKGITEQQKEGIQMVKKVMMSLEGEDGLDEIYSFSESLRQLCIFKKI
EKHSMPWPCQLTIGSNLSIRIVAYKSILQEKVKQSWTAVDARTLKKEDIRKETVYCLNDD
DETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVHRKYFMGNQ
VLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDKKANPQVGVAFPYIKDAYECLV
YIQLPFMEDLRQYMFSSLKNNKKCTPTEAQLSAVDSLIDSMCLVKKDEEEGTIEDLFPTV
KIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILNMLDPPTEVTAKCQIPLSKIKTLFPLT
EVIKKKDQVTAQDIFQDNHEEAPSSKKLKTEEEEAHFRISSLAEGSVTRVGSVTPAENFR
VLVRQKKASFEEASHQLISHIEQFLDTNETPYFMKSMDCIKVFREEAIQFSEEQRFNNFL
RALREKVEMKQLNHFWEIVIQDGMTLITKDEASGSSVTVEEAQKFLEPEENPNEDTAAML
EEGGDVDDLLDLI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtgggggaataaggcagctgtagtgctgtgtgtggatgtaggctttgccatg
agtaactcctttcctggtgaagaatccccatttgaactagcaaagaaggtgataaccatg
tttgtgcagcgacaggtgtttgctgagagcaaggatgaaattgcattagtcctttttggt
acagacggcacggagaatgccctcgctggtaaggatcagtatcagaacatcacagtgcat
agacacctgaagctaccagactttgacttgctggaggacattgaaagcaaaatccaacca
ggttctcaacaagctgacttcctggatgccctcatcgtgtgcatggatttgattcaacaa
gaaactataggaaagaagtttgagaagaggcatattgaagtgttcactgacctcagcagc
ccattcagcaaagatcagctggacattatcattcataacttgaagaaatctggcatctcg
ctgcaattctttttgcctttcccagttggcaaggaagatggaactggggacagaggagac
agcagcttgcgcccagaccaccatggaccctcctttcctctgaaaggaattactgagcag
caaaaagaaggtattcagatggtgaaaaaggtgatgatgtctctagaaggtgaagatggg
ctggatgaaatatattcctttagtgagagtctgagacaactgtgcatctttaagaaaatt
gagaagcattccatgccctggccttgtcaactgaccattggctccaatttgtctataagg
attgtggcttacaaatcgattctccaggagaaagttaaacagtcttggacagctgtggat
gcaagaaccctaaaaaaggaagatatacgaaaagaaacagtttattgcttgaatgatgat
gatgaaactgaagttccaaaagaggatactattcaagggttccgctatgggagtgatatc
attcctttctccaaagtggatgaggaacaaatgaaatataaatcggaggggaagtgcttc
tcagttttgggattttgtcgatcttctcaggtccacaggaaatattttatgggaaatcaa
gttctaaaggtctttgcagcaaaagatgatgaggcagcagcagttgccctttcctccttg
atacatgctctggacgaattagacatggtggccgtagttcgatacgcctatgacaaaaaa
gctaatccccaagttggcgtggcttttccctatatcaaggatgcctatgagtgtttagtg
tacatccagctgcctttcatggaagacttgcggcagtacatgttttcatccttgaaaaat
aacaagaaatgcactcccacagaggcgcagttgagtgctgttgattctttgattgactcc
atgtgcttggtaaagaaagatgaagaggaaggcaccattgaagacttatttccaactgtc
aaaatcccaaatcctcaattccagaggttatttcagtgtctgctgcacagagctttacat
ccccaggagcctctgcccccaattcagcagcatattttgaatatgctggatccccccacc
gaggtgacagctaagtgtcagattcctctctctaaaataaagaccctttttcctctgact
gaagtcatcaagaaaaaggaccaagtgactgctcaggacattttccaagacaaccatgaa
gaggcacccagctctaaaaaactgaagactgaggaagaggaagcccactttcgtatctcc
agcctggctgaaggcagtgtcacccgtgtcggaagtgtgactcctgctgaaaacttccgt
gttctagtgaggcagaagaaggccagcttcgaggaagcgagtcaccagctaataagtcac
attgaacagtttttggatactaacgaaacaccgtattttatgaagagcatggactgtatc
aaagtcttccgggaggaagccattcagttttcagaagagcagcgctttaacaatttcctg
agagcccttcgagagaaagtggaaatgaaacaattaaatcatttctgggaaattgtcatc
caggatggaatgactctgatcaccaaagatgaagcttctggaagctctgtcacagtcgag
gaagcccaaaagtttctggaacctgaagaaaatccaaatgaagacacagcagccatgctc
gaggagggtggtgacgtagatgatttgctggacttgatatag
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