Sus scrofa (pig): 100514152
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Entry
100514152 CDS
T01009
Symbol
PAX6
Name
(RefSeq) paired box protein Pax-6 isoform 1
KO
K08031
paired box protein 6
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04550
Signaling pathways regulating pluripotency of stem cells
ssc04950
Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100514152 (PAX6)
09160 Human Diseases
09167 Endocrine and metabolic disease
04950 Maturity onset diabetes of the young
100514152 (PAX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100514152 (PAX6)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100514152 (PAX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
HTH_23
HTH_Tnp_IS1
Homeobox_KN
DUF6115
HTH_28
Motif
Other DBs
NCBI-GeneID:
100514152
NCBI-ProteinID:
NP_001231101
Ensembl:
ENSSSCG00000013320
UniProt:
A0A8D1F5F2
A0A4X1SWS9
LinkDB
All DBs
Position
2:28971565..29001149
Genome browser
AA seq
422 aa
AA seq
DB search
MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRY
YETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSV
SSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQ
EGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFAR
ERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIP
QPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPT
SPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPR
LQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagtcacagcggagtgaatcagctcggtggtgtctttgtcaacgggcggcca
ctgccggactccacccggcagaagatcgtagagctagctcacagcggggcccggccgtgc
gacatttcccgaattctgcaggtgtccaacggatgtgtgagtaaaattctgggcaggtat
tacgagactggctccatcagacccagggcaatcggtggtagtaaaccgagagtagcgact
ccagaagttgtaagcaaaatagcccagtataagcgggagtgcccgtccatctttgcttgg
gaaatccgagacagattactgtccgagggggtctgtaccaacgataacataccaagtgtg
tcatcaataaacagagttcttcgcaacctggctagcgaaaagcaacagatgggcgcagac
ggcatgtatgataaactaaggatgttgaatgggcagaccggaagctggggcacccgcccc
ggttggtatccggggacgtcggtgccagggcaacctactcaagatggctgccagcaacag
gaaggagggggagagaataccaactccatcagttccaatggagaagactcagatgaggcc
caaatgcgacttcagctgaagcggaagctgcaaagaaatagaacatcctttacccaagag
caaattgaggccctggagaaagagtttgagagaacccattatccagatgtgtttgcccga
gaaagactagcagccaaaatagatctacctgaagcgagaatacaggtatggttttctaat
cgaagggccaaatggagaagagaagagaagctgaggaatcagagaagacaggccagcaac
acacctagtcatatccccatcagcagtagtttcagtaccagtgtctaccaaccaatccca
caacccactacacctgtttcctccttcacctctggttccatgttgggccgaacagacaca
gccctcaccaacacctacagtgctctgccacccatgcccagcttcaccatggcaaataac
ctgcctatgcaacccccagtccccagccagacctcctcgtactcctgcatgctgcccacc
agcccttcggtgaacgggcggagttatgatacgtacacacccccccacatgcagacacac
atgaacagtcagccgatgggcacctcgggcaccacttccacaggactcatttcccctggt
gtgtcagttccagttcaagttcctggaagtgaacctgatatgtctcaatattggccaaga
ttacagtaa
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