Sus scrofa (pig): 100514160
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Entry
100514160 CDS
T01009
Symbol
XYLT1
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssc00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ssc01100
Metabolic pathways
Module
ssc_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100514160 (XYLT1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
100514160 (XYLT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
100514160 (XYLT1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
100514160 (XYLT1)
Glycosyltransferases [BR:
ssc01003
]
O-Glycan biosynthesis
Glycosaminoglycan
100514160 (XYLT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
100514160
NCBI-ProteinID:
XP_020942214
Ensembl:
ENSSSCG00000007872
ENSSSCG00000022093
UniProt:
A0A8D0YE74
F1RLT2
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All DBs
Position
3:complement(27158438..27492629)
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AA seq
956 aa
AA seq
DB search
MVAAPCARRLARRSHSALLAALTVLLLQTLVVWNFSSLDSGAGERRGGAAAGGAEQPPPA
PAPRRERRDLPAEPAAARGGGGGGGGGRGPPARARGGGPGAPRVQQLASRGALASRALDP
QPSPVITLETQDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRSQKQKHQPELAK
KPPKGQKELLKRKLEQEDKGKGRPSPGKGTNEVQPPGERAVVNGSRGKDPPRQPPARKGG
AGSPELRSDQPLKCDISGKEAISALSRAKSKHCRQEIGETYCRHKLGLLMPEKVTRFCPL
EGKANKNVQWDEDSVEYMLANPVRIAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKR
SNYLHRQVLQFAAQYSNVRVTPWRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLS
AADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRI
PEGIAVDGGSDWFLLNRKFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHCD
SMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFEAV
VNQEIIGQLDYYLYGNYPAGTPGLRSYWENVYDEPDGIHSLSDVMLTLYHSFARLGLRRA
EASLHAEGDNSCRYYPMGHPASVHLYFLADRFQGFLIKHHATNLAVSKLETLETWVMPKK
VFKIASPPSDFGRLQFSEVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTVTVI
WVDPVNIIAATYDILIESTAEFTHYKPPLNLPLRPGVWTVKILHHWVPVAETKFLVAPLT
FSNRQPIKAEEALKLHSGPLRNAYMEQSFQSLNPVLSLPISPAQVEQARRNAASTGATLE
RWLDSLVGGVWTAMDICATGPTACPVMQTCSQTAWSSFSPDPKSELGPVKPDGRLR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcgccgtgcgcccggaggctggcccggcgttcgcactcggcgctgctcgcg
gcgctcaccgtgctgctactgcagacgctggtcgtgtggaatttcagcagcctagactcc
ggggccggggagcgccgcgggggcgcagcggctggcggcgcggagcagccgcccccggcc
ccggccccgcgccgagagcgccgggacctgcccgccgagccagctgcagcccgaggagga
ggaggcggcggcggcggaggacgggggcccccggcgcgggcgcggggaggcggccccgga
gcaccccgcgtgcagcagctggccagccggggggcactggcctcgcgggcgctggaccca
cagccaagccctgtgatcaccctggagacccaggatggctacttctcccaccggccgaag
gagaaagtgcgaacggacagcaacaacgagaactcggtgcccaaggactttgagaacgtg
gacaacagcaacttcgcacccaggtctcaaaagcagaagcaccagcccgagctggcgaag
aagccccccaagggacagaaggagcttctgaagcggaagctggagcaggaggacaagggg
aaggggcgtccctccccggggaaaggtaccaacgaggtgcagcctcccggcgagagagcc
gtggtgaacggcagccgcgggaaggacccccccagacaaccccccgcccggaagggcggg
gccggctcccccgagctcaggtctgaccagcccctcaagtgcgacatctcgggcaaggag
gccatctctgccctgtcccgcgccaagtccaagcactgccgccaggagatcggggagacc
tactgccgccacaagctggggctgctgatgccggagaaggtcactcggttctgccccctg
gaaggcaaagccaacaagaacgttcagtgggacgaagattcggtggagtatatgctggcc
aacccggtcagaatcgccttcgtcctagtggtccacggccgcgcctctcggcagctgcag
cgcatgttcaaggccatttaccacaaggaccacttctactacatccacgtggacaagcgc
tcaaattacctgcatcggcaagtgctgcagttcgcagcgcagtacagcaacgtccgcgtc
accccctggaggatggccaccatctggggcggagccagcctcctgtccacgtacctgcag
agcatgcgggacctcctggagatgaccgactggccctgggacttcttcatcaacctcagc
gccgccgactaccccatcaggacaaatgaccagctggtggcatttctctctcgataccga
gacatgaatttcttgaagtcacatggccgggacaatgcaaggttcatccggaaacagggc
ctggaccggctcttcctggagtgtgacgcccacatgtggcgcctgggggaccggcggatc
ccagagggcattgcggtggatggcggctcggattggttcctgctaaaccggaagtttgta
gagtatgtgacattctctaccgacgatctggtgacgaaaatgaagcagttctactcgtac
accctgcttcctgccgagtccttcttccacacagtcctggagaacagcccccactgcgac
agcatggtggacaacaacctgcgtatcaccaactggaaccgcaagctgggctgcaagtgc
cagtacaagcacattgtggactggtgcggctgctcgcccaacgacttcaagccgcaggac
ttccaccgcttccagcagacagcccggcccaccttctttgcccgcaagttcgaagcggtg
gtgaatcaggaaatcatcgggcagctggactattacctgtacgggaactacccggcgggc
accccgggcctgcgctcctactgggagaacgtctacgatgagccggacggcatccacagc
ctgagcgacgtgatgctgaccttgtaccattctttcgcccgcctgggcctccgccgagcc
gaggcgtcgctgcacgcagagggggacaatagctgcaggtactatccgatgggccacccg
gcatctgtccacctctacttccttgccgaccgtttccagggctttctgatcaagcatcat
gctaccaacctggccgtgagcaaacttgagactctggagacgtgggtgatgccgaagaaa
gtcttcaagatcgccagcccccccagtgacttcgggaggcttcagttttccgaggtcggc
actgactgggatgccaaggagaggctcttccgcaactttgggggtctcctggggcccatg
gacgagccggtgggcatgcagaaatgggggaagggccccaacgtgaccgtgaccgtcatc
tgggtggatcccgtcaacatcatcgcagccacttacgacatcctgattgagtccactgcc
gaattcacccactacaagccacctttgaacttgcccctgaggcctggggtctggacagtg
aaaattctccaccactgggtgccagtggcagaaaccaaattcctcgtggcgcctctgacc
ttctccaacaggcagcccatcaaagcggaggaggcactgaagctgcacagtgggcccctc
cgcaacgcctacatggagcagagcttccagagcctgaaccccgtcctcagcctgcccatc
agcccggcccaggtggagcaggctcgcaggaacgccgcctccaccggcgccacgctggag
cgctggctggactccctggtaggcggggtgtggaccgccatggacatctgtgccacaggc
cccaccgcctgccccgtcatgcagacctgcagccagacagcctggagctccttcagcccc
gaccccaagtcggagctggggccagtcaaacccgacggccggctcaggtag
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