Sus scrofa (pig): 100514251
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Entry
100514251 CDS
T01009
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X8
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100514251 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100514251 (XPC)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100514251 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
DUF7149
Motif
Other DBs
NCBI-GeneID:
100514251
NCBI-ProteinID:
XP_003132441
Ensembl:
ENSSSCG00000011602
UniProt:
F1SPI2
A0A4X1U8S8
LinkDB
All DBs
Position
13:70348841..70397194
Genome browser
AA seq
944 aa
AA seq
DB search
MAPKRSAGRAPRGRKLRGQKAKGEGKARREEKEADVSEDEKPLKKSLLSKVSRGKRKSSC
GASGGPAAGPARKKVARATVKLETPQVVKDEALSDEDDFRDFTSARKKTHLPKKEAAVDT
GACEGDAEEDSEDDWEEVEELTEPVPGGLGENTAFSKSAVPVKPVEIEIETPEQVKARER
SEKIKMEFETQLRRMMKRFNKEVHEDTHKVHLLCLLANGFYRNSICSQPDLRAIGLSIIP
TRFTKVPPQDVDVCYLSNLVKWFIGTFTVNADLSTNEQDGLQTTLERRFAIYSARDDEEL
VHIFLLIIRALHLSARLVLSLQPIPLKSSAAKGKKASKERSTEGPGCSSETSSPGPAKQT
KLKSSSGNRREDPSSEGTSGPRAKGKGSKAAAATKKQREPSSSGEEEGKAAGQQGEARRP
ARGRRRQAATRVSYKEESGSDKASSSSDFELSSGDSHCPSDEDSEPGLRRQRRAPGLPRT
KAGAKSDSRSQRGSHPKPPGFLAASAGPPGSKRKGGKKTSVRGEEADGGKVAGVDHWLEV
FCEREDKWVCVDCVHGVVGQPLTCYQYATKPMTYVVGIDGDGWVRDVTQRYDPAWMTATR
KCRVDAVWWAETLRPYRSPLLEREQREDQEFQAKHLDQPMPTVIGTYKNHPLYALKRHLL
KYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQGRVVRLGEVPYKMVKGYSNRA
RKARLAEPQLRDHNDLPLFGQWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQL
NLPNLQRVARKLNIDCVQAITGFDFHKGYSHPITDGYIVCEEYRDILLAAWENEQALIEK
KEKEKKEKRTLGNWKLLVKGLLIRERLRLRYGTQSKTAAPHTDTGGLSSDEEEGTSSQGE
AARILAASWPQNREAEEERERKCPKRTRREKKEAASHLFPFEKM
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaagcgctcggcgggcagggcgccgcgggggcgcaaactgcgcggccagaag
gccaagggcgagggcaaagcccggcgcgaggagaaggaggcggatgtctctgaagatgag
aaacctctgaagaagagccttctctcaaaagtttcacgaggaaagaggaagagcagctgt
ggtgcttctgggggcccagcagcaggtccagcgagaaagaaggtggccagagcgactgtg
aaattggaaaccccccaggttgtaaaggatgaagccctcagtgatgaggatgacttcagg
gactttacaagcgcccggaagaagacgcaccttccaaagaaagaggctgccgtggacaca
ggggcctgcgaaggggatgccgaggaggacagtgaggatgactgggaagaggtggaagaa
ctcactgagcctgtgcctggtggcttgggagagaacacagccttctctaaatctgctgtg
cctgtgaagccagtggagatagaaattgaaaccccagagcaggtgaaagcacgagaaaga
agtgaaaagataaaaatggagtttgagacacagctgcggaggatgatgaagcgtttcaat
aaggaagtccatgaggacacacacaaggtccaccttctgtgtctgctggcaaatggcttc
tatcgaaatagcatctgcagccagccagacctgcgtgccattggcctctccatcatccca
actcgctttaccaaagtgccaccccaagacgtggatgtctgctacctgtcgaacctggtg
aaatggttcattggaacatttacagttaatgcagacctttcaaccaatgagcaggatggc
ctgcagacgacgttggagaggaggtttgctatttactctgcaagagatgatgaagagttg
gtccatatatttctgctaatcatccgggccctgcatctctctgcccgacttgtgctgtcc
ctacagccaattccgctgaagtcgtcagcagcaaagggaaagaaagcttccaaggagaga
tccacagagggacctgggtgttcctcagaaacttccagcccaggtcccgcaaagcaaacc
aaactgaagagcagcagcggaaacagacgggaggacccctcttctgagggtaccagtggt
ccccgggccaaagggaaggggagcaaggcggctgcagccacgaagaaacagagagagccg
tcctccagcggggaagaggagggcaaggcggcagggcagcagggtgaggcccggagacct
gcacgcggacggcggcggcaggcagccaccagggtatcttacaaggaggagagtggcagt
gacaaggccagcagtagctctgactttgagctctccagtggggacagccattgcccatcc
gacgaagattctgagcctggcctccggaggcagaggagagccccaggcctgccgaggaca
aaggcgggggccaagagtgactccaggtcccagcgtggcagccaccccaagcccccaggc
tttctggcagcatctgcaggcccgccaggcagtaagcgtaaaggaggcaagaagacatcc
gtgcgtggggaggaggcagacggagggaaagtggctggtgtggaccactggctggaggtg
ttctgtgagcgggaggacaagtgggtgtgtgtggactgtgtgcacggggtggtgggccag
cccctgacctgttaccagtacgccaccaagcctatgacctacgttgtgggcatcgacggt
gatggctgggtccgtgacgtcacccagaggtatgatcctgcctggatgacagctacccgc
aagtgccgggtggacgccgtgtggtgggccgagaccctgcgaccctaccggagcccgctg
ctagagagggagcagagggaggaccaggagtttcaggcaaagcacctggaccagcctatg
cccactgtcatcggcacatacaagaaccacccgctgtatgccctgaagaggcacctccta
aagtatgaggccatctaccccgagacggctgccatcctcggctactgccgtggggaagcc
gtgtactccagggattgtgtgcataccctgcactccagggacacgtggctgaaacaaggg
agagtggtgaggctgggagaagtgccctacaagatggtaaaaggctattctaaccgggcc
cggaaggcccgcctggccgagccgcagctgcgggaccacaacgacctgcccctgtttggc
cagtggcagaccgaggagtaccagccgcctgtggctgtggacgggaaggtcccccggaat
gagtttgggaacgtgtacctcttcctgcccagcatgatgcctgtgggctgcgttcagctg
aatctgcccaacctgcagcgtgtggcccggaagctgaacatcgactgtgtccaggccatc
actggctttgacttccacaaaggctactctcatcccataactgatggctacatagtgtgt
gaggagtacagagacattctcctggccgcctgggagaacgagcaggcgctcatcgagaag
aaggagaaggagaagaaggagaagcggactctggggaactggaagctgctggtcaaaggg
ctgctcataagggagcggctgaggcttcgctacgggacacagagcaagacagctgctccc
cacacagacacaggaggactgtcttcagacgaggaagagggcaccagctcgcaaggggaa
gcggccaggatcctggctgcctcctggccccaaaaccgagaggctgaggaggaacgggag
cggaaatgccccaagagaaccaggagggagaagaaggaggcagcttcccacctgttccct
tttgagaagatgtga
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