Sus scrofa (pig): 100514291
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Entry
100514291 CDS
T01009
Symbol
SIPA1L3
Name
(RefSeq) LOW QUALITY PROTEIN: signal-induced proliferation-associated 1-like protein 3
KO
K17703
signal-induced proliferation-associated 1 like protein 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04015
Rap1 signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100514291 (SIPA1L3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPAR_C
Rap_GAP
Rap-GAP_dimer
PDZ
ATG16
PDZ_6
ZapB
Motif
Other DBs
NCBI-GeneID:
100514291
NCBI-ProteinID:
XP_020949989
Ensembl:
ENSSSCG00000023220
LinkDB
All DBs
Position
6:46948078..47139551
Genome browser
AA seq
1786 aa
AA seq
DB search
MTAYRPIPNDGVDLAASCGARAADVLPGPHTADYTPMGFWVQNGSMPQPXGESPAGAPTR
PSPTTPAVPKMGVRARVADWPPKREALREQNNPSPSQDADGTKAAKAVHSMRGIQNGQPP
ASTPASSGPKAFHRLSRRRSKDVEFQDGWPRSPGRAFLPLRHRSSSEITLSECDAEDTAE
PRGTRHPGALPLFREYGSTSSIDVQGVPEQSFFDILNEFRSEQPEALGAATLAGLLRAEP
GSHLAGGGSGAKGDARNGQPAKDSLLXLPPAKEKEKARKKPARGLGGGDAVDSSIFRKLR
SSKAEGEAARCPGEAEEGRSPPETSRPWVCQKSFAHFDVQSMLFDLNEAAANRASTAQRR
NTTTGASAASATASLTASRAHSLGALDPAFTSTEDLNCKENLEQDLGDDNSNDLLLSCPH
FRNEIGGECERNVSFSRAAAGSPVGGGGGGGGGGGEGRPQEPALSSYRTNASISVLEVPK
EQQRTQSRPRQYSIEHVDLGARYYQDYFVGKEHANYFGVDEKLGPVAVSIKREKLEDHKD
HGPQYQYRIIFRTRELITLRGSILEDATPTATKHGTGRGLPLKDALEYVIPELNIHCLRL
ALNTPKVTEQLLKLDEQGLCRKHKVGILYCKAGQSSEEEMYNNEEAGPAFEEFLCLLGEK
VCLKGFTKYAAQLDVKTDSTGTHSLYTTYQDYEIMFHVSTLLPYTPNNRQQLLRKRHIGN
DIVTIIFQEPGALPFTPKNIRSHFQHVFIIVRAHNPCTDNVCYSMAVTRSKDAPPFGPPI
PSGTKFRKSDVFRDFLLAKVINAENAAHKSDKFHTMATRTRQEYLKDLAENCVSNTPIDS
TGKFNLIALTSKKKEKTKARAGAEQYSAGAIAWRVAAQDYAQGVEIDCILGISNEFVVLL
DLRTKEVVFNCYCGDVIGWTPDAATLKIFYGRGDHIFLQAAEGSVEDIREIVQRLKVMTN
GWETVDMTLRRNGLGQLGFHVKYDGTVAEVEDYGFAWQAGLRQGSRLVEICKVAVVTLTH
DQMIDLLRTSVTVKVVIIPPFDDGTPRRGWPETYDMNTSEPKTEPESLAPGGRPPYRSNA
PWQWSGPASHNSLPASKWAAPATPGHAQSLSRPPKQTPMVPFRESQPLHSKRPVSFPETP
YTASPAGADKVPPYRQPSGSFSTPSSATYARYKPSPERYAAAPHPLLSFDPHFSHDATSS
GDSSSGGLTSQESTMERQKPEPLWHVPAQARLSAMVGSSGSKHTSRQDAAGKDSPNRHSK
GEPQYSSHSSSNTLSSNASSSHSDDRWFDPLDPLEPEQDPLSKGGSSDSGIDTTLYTSSP
SCMSLAKTPRPAKPHKPPGSIGLCGGGHEAXGRPYHADRRREVSPAPGVPGQNKGYRPKL
YSSGSSTPTGLAGGSRDPPRQPSDMSSRAGYPAQVHKTASAETPRPAQLAQPSAFQLSAS
VPKSFFSKQPVRNKHPAGWKRTDEPPPRPLPFTDPKKQVDSNTKNVFGQPRLRASLRDLR
SPRKNYKSTIEDDLKKLIIMDNLPPEQERDAGQSPQKSLQRTLSDESLCSGRREPSFANP
ASLEPGLPSDVLFTSTCAFPSSTLPARRQHQHPHPPGGPSTGPAAAAAPAGNGFPEKKPT
ISTSELSLADGRDRPLRRLDPGMMPLPDTAAGLEWSSLVNAAKAYEVQRAVSLFSLNDPA
LSPDIPPAHSPVHSHLSLERGPPTPRTTPTMSEEPPLDLTGKVYQLEVMLKQLHTDLQKE
KQDKAVLQSEVASLRQNNQRLQEESQAASEQLRKFAEIFCREKKEL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctatcggcccattcccaacgatggtgtggacctggcagccagctgtggggcc
agggcggctgacgtcctcccggggccccacacagcggactacactcccatgggattctgg
gtccagaacggcagcatgccccagccgntgggggagagcccggccggcgcccccacccgc
cccagccccaccacccccgcagtgcccaagatgggcgtgcgtgcaagagtggccgactgg
ccgcccaagcgggaggccctgagagagcagaacaacccgagcccctcacaggacgccgac
ggcacgaaggccgcaaaggcggtccattccatgaggggaatacagaacggtcagcccccc
gccagcaccccggcttcctcagggcccaaagccttccaccgactgtccaggagaaggtct
aaagatgtggaattccaggacgggtggccccggtccccgggcagggccttcctcccactg
cggcaccgcagcagcagcgaaatcaccctcagcgagtgcgacgcggaggatacggccgag
ccccgggggacccggcacccaggggcgctgccgctcttccgcgagtacgggagcacgtcc
tccatcgacgtgcagggcgtgcccgagcagagcttcttcgacatcctcaacgagttccgc
agcgagcagcccgaggcccttggcgccgcgaccctcgcagggctcctccgggccgagcct
ggctcgcacctggcggggggcggcagcggggccaagggggacgcccgcaacgggcagccc
gcgaaggacagcctgctgncgctgccgcccgccaaggagaaggagaaagcccggaagaag
cccgcgcgcggcctgggcggcggggacgcggtggactcgtccatcttccggaagctgcgg
agcagtaaagccgagggcgaggcggcccgctgccccggggaggccgaggagggccggagc
ccgccggagaccagccggccgtgggtctgccagaagagcttcgcccacttcgacgtgcag
agcatgctgttcgacctcaacgaggcggccgccaaccgggcgtccacggcccagcggcgg
aacacgaccacgggggcctcggccgcctccgccacggcgtccctgacggcgtcgcgggcc
cacagcctcggtgccctggaccccgccttcaccagcaccgaggacttgaactgcaaggag
aacctggagcaggacctcggcgacgacaacagcaacgacctgctgctcagctgtccgcac
tttcgcaacgagatcggaggcgagtgtgagcgcaacgtgagcttctctcgagcggctgcg
ggctccccggtcggaggtggaggtggtggcggcggcggcggcggcgagggccgcccgcag
gagcctgccctgagctcctaccgcaccaacgccagcatctccgtgctggaggtgcccaag
gagcagcagaggacgcagagtcgcccgaggcagtacagcatcgagcacgtggacctgggc
gcccgctactaccaggactacttcgtgggcaaagagcatgccaattactttggcgtggac
gagaagctggggccagtggctgtgagcatcaagcgggagaagctagaggaccacaaggac
catgggcctcagtaccagtaccggatcatcttccggacccgagagctcatcaccctgcgg
ggctccatcctggaggacgccacccccacggccacgaagcacggcaccgggcggggccta
cccctgaaggacgccctggaatacgtcatccctgagctcaacatccactgcctgcggctg
gctctcaacactcccaaggtgacggagcagctgctgaagctcgacgagcaagggctctgc
cggaaacacaaggtgggcatcctctactgcaaggccggccagagctcggaggaggagatg
tacaacaacgaggaggcagggccggccttcgaggagttcctctgcctccttggggagaag
gtctgcctgaagggcttcaccaagtacgccgcccagctggatgtcaagactgactccacg
ggaacccactccctctacacgacgtaccaggactacgagatcatgttccacgtctccacc
ctgctcccttatacccccaacaacaggcagcagctgctgaggaagaggcacataggaaac
gacatcgtgaccatcatcttccaggagcctggggcgctgcctttcacccccaaaaacatc
cgctcgcattttcagcacgtcttcatcatcgtccgagcccataacccttgcaccgataac
gtctgctacagtatggctgtgacccgatccaaagacgcgcctcctttcggcccccccatc
cccagtggaaccaaattccgcaaatctgacgtcttcagagacttcttgctggccaaggtg
attaacgccgagaatgccgcgcacaagtccgacaagttccacaccatggccaccaggacc
cgccaggaatacctcaaggacctggctgaaaactgtgtctccaacacacccatcgactcc
accggcaagttcaacctcatcgccctgacctccaagaagaaggagaagacaaaagcccgg
gcaggtgccgagcagtacagcgccggggccatcgcctggagggtggcggctcaggactac
gcccagggggtggaaatcgactgcattttgggaatttccaacgagtttgtggtgcttctg
gacctgcgcaccaaggaggtggtgttcaactgctactgcggggatgtcatcggctggacc
ccggacgccgcgacgctcaaaatcttctatgggcgaggggaccacatcttcctgcaggcc
gccgagggctccgtggaggacatacgggaaattgtccagaggctgaaggtgatgaccaac
ggctgggagacggtggacatgaccctgcggcggaatgggcttgggcagctgggcttccac
gtgaagtatgacgggactgtggccgaggtggaggactacgggtttgcctggcaggccggg
ctccggcagggcagccgcctggtggagatctgcaaggtggccgtggtcaccttgacccac
gaccagatgatcgacctgctgcgcacgtctgtcaccgtcaaagtggtcatcatcccgcct
ttcgacgacggcacgccccgcagggggtggccggagacctatgacatgaatacctcggag
cccaagaccgagccggagagcctggccccggggggccggcccccctaccgcagcaatgct
ccctggcagtggagcgggcctgcgtcccacaactcgctacctgcctccaagtgggcggcg
cccgccacccccggccacgcccagtccctgagccggcccccgaagcagacccccatggtc
cccttccgggagtcccagcccctgcacagcaagaggcccgtcagcttccccgaaacccct
tacacggcgtcaccagcaggggccgacaaagtccctccctaccggcagccttctgggagc
ttctccacccccagctcggccacctacgcaagatacaagccatccccagaaaggtacgca
gccgccccgcacccgctgctgtcttttgatccccacttcagccacgatgcaacgtccagt
ggcgactcctcctcaggcggcttgaccagccaggagagcaccatggagcgccagaagcca
gagcctttgtggcatgtgcccgcccaggcccggctctcagccatggtcggaagcagcggg
agcaagcacacctccaggcaggacgcagcaggcaaagattcccccaacaggcattccaaa
ggcgagcctcagtactccagtcattccagcagcaataccctctccagcaacgcgtccagc
agccacagtgacgatcgctggttcgacccgctggaccccctggagccagagcaagaccct
ctctccaagggcggctccagcgacagcggcattgacaccaccctctacacctccagcccc
agctgcatgtccttggccaagacgcctcggccggccaagccgcacaagcccccaggaagt
ataggtctttgtgggggcgggcacgaggctngcggacggccctaccacgcagaccggcga
cgagaggtctcgcctgcccctggggtccctggccagaacaagggctacagaccgaagctg
tactcctcaggctccagcacccctacaggcctggctgggggcagccgcgacccaccgagg
cagcccagcgacatgagctcgagggccggctaccccgctcaggttcacaagacggccagc
gcagagaccccgcggcccgcacagctggcccagcccagcgccttccagctctccgcctcc
gtccccaagtccttcttctccaagcagcccgtgcgcaacaagcacccagcagggtggaag
agaacagacgagcccccgccacggccgctccccttcaccgacccaaagaagcaggtggac
agcaacacgaaaaacgtctttggtcagccgaggctgagggcctccctccgagacctccgc
tccccgcggaagaactacaagtccaccatcgaggatgacctgaagaagctcatcatcatg
gacaacctgccgcccgagcaggagagagacgccggccagtcaccacagaagagcctgcag
aggacgctgtcggacgagagtctgtgcagcgggcgtcgggagcccagcttcgccaaccct
gccagcctggagccgggcctgcccagtgatgtgctcttcaccagcacctgcgccttcccc
tccagcacgctgcccgcccgccgccagcaccagcacccccacccgcccggcggccccagc
accggccctgccgccgccgccgcccctgccggcaatggcttcccagagaagaaacccacc
atctccacctccgagctctcactggccgatgggcgggaccggccgctgcggcgcctggac
ccaggcatgatgccgctgccagacacagctgctggcctcgagtggtccagcctggtcaac
gcagccaaggcgtatgaagtgcaacgagctgtgtcactcttctctctcaacgacccagct
ctgagcccggacatcccgcctgcacacagtcccgtccacagccacctgagcctggagagg
gggcccccgacccccaggaccacccctaccatgagtgaggaaccacccctggatctgaca
ggcaaggtgtaccagctggaagtgatgctgaaacagctgcacacggacctccagaaggag
aagcaggacaaggcggtgctgcagtccgaggtggccagcctgcggcagaacaaccagcgg
ttgcaggaggagtcacaggccgccagcgagcagctgcgcaagttcgccgagatcttctgc
agggaaaagaaggaactctga
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integrated database retrieval system
