Sus scrofa (pig): 100514334
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Entry
100514334 CDS
T01009
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X2
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04120
Ubiquitin mediated proteolysis
ssc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100514334 (SYVN1)
04120 Ubiquitin mediated proteolysis
100514334 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100514334 (SYVN1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100514334 (SYVN1)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100514334 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
100514334
NCBI-ProteinID:
XP_003122589
Ensembl:
ENSSSCG00000027057
LinkDB
All DBs
Position
2:7059444..7066617
Genome browser
AA seq
610 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPNQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPSTSAALSRPSGAA
TTTAASPASAPAPGSASAPEAGPASGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPE
ELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSANPTEETT
PTAVAAASSASIPSFEATTPSPEASPPALEPEKPPAPESSGTEELPEDGEPDAAELRRRR
LQKLESPVAH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgccgtgatgatggcggccagcctggcgctgaccggggccgtggtggct
cacgcctactacctcaagcaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagcatggccgtcctgtacatccaggccttcgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttctttggacagctgagggcagcagagatggagcaccttctggaacgt
tcctggtatgccgtcactgagacgtgtctggccttcactgtctttcgggatgacttcagc
ccccgctttgttgccctcttcactctcctcctcttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggagcgcagccccaacatctcctggctcttccactgccgc
attgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtacgccatc
ctgatgaccatggtgctgaccatcttcatcaagtacgtgctgcactccgtggacctgcag
agcgagaacccctgggacaacaaggctgtgtacatgctctacacggagctgttcacaggc
ttcatcaaggttctgctgtacatggctttcatgaccatcatgatcaaggtgcacaccttc
cccctctttgccatccggcctatgtacctggccatgaggcagttcaagaaagctgtgacc
gacgccatcatgtctcgccgagccatccgcaacatgaacacactgtatccagatgccacc
gcagaggaactccaggccatggacaatgtctgcatcatttgcagagaagagatggtgacg
ggtgccaagagactgccctgcaaccacattttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccctacctgccgcatggacgtcctgcgggcatcactgccgaac
cagtcaccaccaccccctgaacctgcggatcaggggccaccacctgccccccaccctcca
ccactcttaccccagccccccaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctctggccccccatgggcccctttcctcctgttccacctccccccagctca
ggggaggctgcggcccctccttccaccagtgcagccctttctcggcccagtggagcagcc
acaaccacagctgcttctcctgcctccgccccggcgcctggctctgcctccgcccccgaa
gccggccccgcctcgggcttccccttccctcctccctggatgggcatgccgctgcctcca
ccctttgccttccccccaatgcctgtgcctcctgctggctttgccgggctgaccccggag
gaactgcgggctctggaaggccatgagcggcagcacctggaggcccggctacagagcctg
cgcaacatccacacgctgctggacgctgccatgctgcagatcaaccagtacctcaccgtg
ctcgcctccctggggcccccccggcctgccacctcagccaacccgactgaggagaccacc
cctacagctgtcgctgctgcttcctctgccagcatccccagctttgaggccaccacccca
tccccagaagcctccccaccagccctggaaccggaaaagcctccagctcctgagtcatcg
ggcaccgaggagctgcccgaggatggggagcctgatgcagcggagctccgccgccgtcgc
ctacagaagttggagtccccggttgcccactga
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