Sus scrofa (pig): 100514347
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Entry
100514347 CDS
T01009
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100514347 (DDX17)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100514347 (DDX17)
Spliceosome [BR:
ssc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100514347 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100514347
NCBI-ProteinID:
XP_020947146
Ensembl:
ENSSSCG00000000104
LinkDB
All DBs
Position
5:9485792..9505157
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AA seq
731 aa
AA seq
DB search
LPAAFITPILCVLLPSPTREAATVASATGDSASERESAAPAAAPTAEAPPPSVVTRPEPQ
ALPSPAIRAPLPDLYPFGTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKK
KWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQ
YVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLE
RGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIA
TPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP
KEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENK
TIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASR
GLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEA
NQAINPKLMQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRD
SASYRDRGETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGAG
TYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYP
PPPPPPPPSRK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
ctacccgctgctttcataaccccgattctctgtgttttgctcccgtctccgacgagagag
gcggcgacggtggcgtctgcgacgggagacagcgcgtcggagcgagagagcgccgcgcct
gccgccgccccaacagcggaggcgccgccgccatcggtcgtcaccagaccggagccgcag
gccctcccgagcccggccatccgtgccccgctcccagatctctatccatttgggaccatg
cgcggaggcggctttggggaccgggaccgggatcgtgaccgtggaggatttggagcaaga
ggtggtggcggccttcccccaaagaaatttggtaatcctggggagcgtttacgtaaaaag
aagtgggatttgagtgagctccctaagtttgagaagaatttttatgttgaacatccagaa
gtggcaaggttgactccgtatgaggttgatgaactacgccgaaagaaagagattacagtg
agagggggcgatgtttgtcctaaacctgtgtttgccttccatcatgctaacttcccacaa
tacgtaatggatgtgttgatggatcagcactttacagaaccaactccgattcagtgccag
ggatttcccttggctcttagtggccgggatatggtgggcattgctcagactggctctggg
aagacattggcgtatttgctgccggcaattgttcatattaaccaccagccttacttggaa
aggggagacggcccaatttgtctagttctggctcctaccagagagcttgcccagcaagtg
cagcaggtggccgatgactatggcaaatgttctagattgaagagtacttgcatttatgga
ggtgctcctaaaggtccccagattcgagatttggagagaggtgttgaaatctgtatagct
actcctggacgcctgatagatttcctggagtcaggaaagacaaatcttcgccggtgtact
taccttgtactggatgaggctgacagaatgcttgacatgggctttgaaccccagattcgt
aaaattgttgaccaaattaggcctgataggcagacattgatgtggagtgcaacctggccg
aaagaagtaagacagcttgcagaggatttccttcgtgattacactcagatcaatgtaggc
aatctggagttgagtgccaaccacaacatcctccagattgtggatgtctgcatggagagt
gaaaaagaccacaagttgatccagctcatggaggaaataatggcggaaaaggaaaataag
acaataatatttgtagagacaaagagacgctgtgatgacctcactcgaaggatgcgcaga
gatggttggccagctatgtgtatccatggagacaagagtcaaccagaaagagattgggta
cttaatgagttccgttctggaaaggctcccattctcattgccacagacgtagcctcccgt
gggctagatgtggaagatgtcaagtttgtgatcaactatgactatccaaacagctcagag
gattatgtgcaccgtattggccgaacagcccgtagcaccaacaagggcactgcctacacc
ttcttcacccctgggaacctgaagcaggccagagagttgatcaaagtgctggaagaggct
aatcaggctatcaatccaaaactgatgcagctggtggaccacagaggaggcggcggcgga
gggggtaagggaggtcgttctcgataccggaccacttcttcagccaacaatcccaatctg
atgtatcaggatgagtgtgaccggaggcttcgaggagtcaaagatggtggccggagagac
tctgcaagctatcgggatcgtggtgaaaccgatagagccggttatgctaacggcagtggc
tatggaagtccaaattctgcctttggagcacaagcaggccaatacacctatggtcaaggc
acctatggggcagctgcttatggcaccagtggttacacagcccaagaatatggcgctggt
acttatggggctagtagcactacctcaactgggagaagttcacagagttctagccagcag
tttagtgggataggccgatctgggcagcaaccacagccactgatgtcacaacagtttgca
caacctccaggagctaccaacatgataggttacatggggcagactgcctaccaatacccc
cctcctcctcctcccccccctccttcacgtaaatga
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