Sus scrofa (pig): 100514525
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Entry
100514525 CDS
T01009
Symbol
ATXN1L
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04330
Notch signaling pathway
ssc05017
Spinocerebellar ataxia
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100514525 (ATXN1L)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100514525 (ATXN1L)
05022 Pathways of neurodegeneration - multiple diseases
100514525 (ATXN1L)
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
100514525
NCBI-ProteinID:
XP_005664427
Ensembl:
ENSSSCG00000025018
UniProt:
A0A287AZE0
A0A8D0UDN5
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All DBs
Position
6:14836732..14848474
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AA seq
688 aa
AA seq
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MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGIVVAGQSQAGAR
VSLGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP
GIHYPPIHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLTTSHLPHFVPYASL
LAEGATPPPQASSPAHSFNRAPSATSPPGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGY
TLHETPPAGASPVLTPQEGQSALEAAAANGQRQRERNLVRRESEALDSPSSKGEGQGLVP
VVECVVDGQLFSGSQTAQVEVAVPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKDEPS
PLNLSHHNPDPQGEGRGSARNPAEMAEKNQARGLYTQSHQEPMKHRPVPKAMVVANGNLV
PSGTDPGLLPMGSEILVASSLDVQARATFPDKESTPPPITSSHLPSHFMKGAIIQLATGE
LKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVPP
EHPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISISLQSLNGNSVSQASCAPPGQL
GTPRERPERTVLGPREQCDSDGKSQPSGESSRMAEPSQPEPGAQACWPAPSFQRYSMQGE
EARAALLRPSFIPQEVKLSIEGRSNAGK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgttcatgaaaggagtcaggaatgccttccaccaaagaaacgagacctcccc
gtgaccagcgaggatatggggagaactaccagctgctcaactaaccacacaccctccagt
gatgcctctgaatggtcccgagggattgtggtggcagggcagagccaggcaggagccaga
gtcagcctggggggtgatggagctgaggccatcactggtctgacagtggaccagtatggc
atgctgtataaggtggctgtgccacctgccaccttctccccaactggcctcccatccgtg
gtgaatatgagccccttgccccccacatttaatgtagcgtcttcactgattcaacatcca
ggaatccactatcccccaattcactatgctcagctcccatccacctctctgcaatttatt
ggttctccttatagccttccctatgctgtgccacctaatttccttccaagtcccctcctt
tctccttctgccaacctcaccacatctcaccttccacactttgtgccatatgcctcactc
ctggcagaaggagccactcctcccccccaggcttcatccccagcccattcattcaacaga
gccccctctgccacctccccacctgggcagttgccacatcactcgagtactcagccactg
gaccttgctccaggtcggatgcccatttattatcagatgtccaggctacctgctgggtac
accttgcatgaaacccctccagcaggtgccagcccagttcttacccctcaggagggccag
tctgctctggaagcagctgctgccaatggacagagacagcgagagcgaaatctagtgaga
cgggaaagcgaagccctcgactcccccagtagcaagggcgagggccaaggactggtgcca
gtggtagaatgtgtggtggatggacagctattttcaggttctcagactgcgcaggtagag
gtggcagtgccagcacaccgaggtaccccagacaccgaccttgaggtccagcgggtggtt
ggcgctttagcttctcaggactatcgcgtggtggcagctcagaggaaggatgagcccagc
cctctcaacctgtcccatcataaccctgaccctcagggtgaggggcgaggctcagccagg
aaccctgcagagatggctgagaaaaatcaggcccgagggctctacacacagtcccatcaa
gaacccatgaaacatagacctgtacccaaagcaatggttgtagccaatggcaacctggtg
ccctctggaactgacccaggcctgctgcccatgggctcggagatcctggtggcatcaagt
ttggacgtgcaggccagagccaccttcccagacaaggaatcaacgccaccccccattacc
tcttcccacttgccctcccactttatgaaaggcgccatcatccagctggctaccggggag
ctgaagcgggtggaggacctccagacccaggattttgtgcgcagtgccgaagtgagcggg
gggctgaagattgactctagcacagtcgtggacattcaggagagccagtggcctggattt
gtcatgctgcatttcgtggttggtgagcagcagagcaaagtgagcatcgaggtgccgccc
gagcaccccttctttgtatatggccagggttggtcctcctgcagccctgggcggactgca
caactcttctctctgccctgccatcggctccaggtgggagatgtctgcatctctatcagt
ttacagagcttgaacggtaactcagtttctcaggccagctgtgctcccccaggccagctg
ggaaccccccgagaaaggcctgagaggacagtattgggaccccgagagcaatgtgacagt
gatgggaaaagccagccgtcaggtgagagctctcgaatggcagagccctcgcagccagag
ccaggtgctcaggcctgctggccagccccaagcttccaaagatacagcatgcaaggggag
gaggcacgggctgcgctgctccgtccctctttcattccacaagaggtaaagctgtccatc
gaagggcgttccaatgcaggaaaatga
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integrated database retrieval system