KEGG   Sus scrofa (pig): 100514525
Entry
100514525         CDS       T01009                                 
Symbol
ATXN1L
Name
(RefSeq) ataxin-1-like
  KO
K23616  ataxin 1/1L
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04330  Notch signaling pathway
ssc05017  Spinocerebellar ataxia
ssc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100514525 (ATXN1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    100514525 (ATXN1L)
   05022 Pathways of neurodegeneration - multiple diseases
    100514525 (ATXN1L)
SSDB
Motif
Pfam: AXH ATXN-1_C
Other DBs
NCBI-GeneID: 100514525
NCBI-ProteinID: XP_005664427
Ensembl: ENSSSCG00000025018
UniProt: A0A287AZE0 A0A8D0UDN5
LinkDB
Position
6:14836732..14848474
AA seq 688 aa
MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGIVVAGQSQAGAR
VSLGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP
GIHYPPIHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANLTTSHLPHFVPYASL
LAEGATPPPQASSPAHSFNRAPSATSPPGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGY
TLHETPPAGASPVLTPQEGQSALEAAAANGQRQRERNLVRRESEALDSPSSKGEGQGLVP
VVECVVDGQLFSGSQTAQVEVAVPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKDEPS
PLNLSHHNPDPQGEGRGSARNPAEMAEKNQARGLYTQSHQEPMKHRPVPKAMVVANGNLV
PSGTDPGLLPMGSEILVASSLDVQARATFPDKESTPPPITSSHLPSHFMKGAIIQLATGE
LKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVPP
EHPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISISLQSLNGNSVSQASCAPPGQL
GTPRERPERTVLGPREQCDSDGKSQPSGESSRMAEPSQPEPGAQACWPAPSFQRYSMQGE
EARAALLRPSFIPQEVKLSIEGRSNAGK
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgaaacctgttcatgaaaggagtcaggaatgccttccaccaaagaaacgagacctcccc
gtgaccagcgaggatatggggagaactaccagctgctcaactaaccacacaccctccagt
gatgcctctgaatggtcccgagggattgtggtggcagggcagagccaggcaggagccaga
gtcagcctggggggtgatggagctgaggccatcactggtctgacagtggaccagtatggc
atgctgtataaggtggctgtgccacctgccaccttctccccaactggcctcccatccgtg
gtgaatatgagccccttgccccccacatttaatgtagcgtcttcactgattcaacatcca
ggaatccactatcccccaattcactatgctcagctcccatccacctctctgcaatttatt
ggttctccttatagccttccctatgctgtgccacctaatttccttccaagtcccctcctt
tctccttctgccaacctcaccacatctcaccttccacactttgtgccatatgcctcactc
ctggcagaaggagccactcctcccccccaggcttcatccccagcccattcattcaacaga
gccccctctgccacctccccacctgggcagttgccacatcactcgagtactcagccactg
gaccttgctccaggtcggatgcccatttattatcagatgtccaggctacctgctgggtac
accttgcatgaaacccctccagcaggtgccagcccagttcttacccctcaggagggccag
tctgctctggaagcagctgctgccaatggacagagacagcgagagcgaaatctagtgaga
cgggaaagcgaagccctcgactcccccagtagcaagggcgagggccaaggactggtgcca
gtggtagaatgtgtggtggatggacagctattttcaggttctcagactgcgcaggtagag
gtggcagtgccagcacaccgaggtaccccagacaccgaccttgaggtccagcgggtggtt
ggcgctttagcttctcaggactatcgcgtggtggcagctcagaggaaggatgagcccagc
cctctcaacctgtcccatcataaccctgaccctcagggtgaggggcgaggctcagccagg
aaccctgcagagatggctgagaaaaatcaggcccgagggctctacacacagtcccatcaa
gaacccatgaaacatagacctgtacccaaagcaatggttgtagccaatggcaacctggtg
ccctctggaactgacccaggcctgctgcccatgggctcggagatcctggtggcatcaagt
ttggacgtgcaggccagagccaccttcccagacaaggaatcaacgccaccccccattacc
tcttcccacttgccctcccactttatgaaaggcgccatcatccagctggctaccggggag
ctgaagcgggtggaggacctccagacccaggattttgtgcgcagtgccgaagtgagcggg
gggctgaagattgactctagcacagtcgtggacattcaggagagccagtggcctggattt
gtcatgctgcatttcgtggttggtgagcagcagagcaaagtgagcatcgaggtgccgccc
gagcaccccttctttgtatatggccagggttggtcctcctgcagccctgggcggactgca
caactcttctctctgccctgccatcggctccaggtgggagatgtctgcatctctatcagt
ttacagagcttgaacggtaactcagtttctcaggccagctgtgctcccccaggccagctg
ggaaccccccgagaaaggcctgagaggacagtattgggaccccgagagcaatgtgacagt
gatgggaaaagccagccgtcaggtgagagctctcgaatggcagagccctcgcagccagag
ccaggtgctcaggcctgctggccagccccaagcttccaaagatacagcatgcaaggggag
gaggcacgggctgcgctgctccgtccctctttcattccacaagaggtaaagctgtccatc
gaagggcgttccaatgcaggaaaatga

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