Sus scrofa (pig): 100514561
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Entry
100514561 CDS
T01009
Symbol
CDHR5
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100514561 (CDHR5)
Cell adhesion molecules [BR:
ssc04515
]
Cadherins
Cadherin related
100514561 (CDHR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
100514561
NCBI-ProteinID:
XP_013845324
Ensembl:
ENSSSCG00000012852
LinkDB
All DBs
Position
2:complement(376449..382713)
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AA seq
839 aa
AA seq
DB search
MGTWPLLLLLLVATAQAQVCSVNQTFFEIEENTTLSAPLLDIYVPEDQQVTLGPSSTLFA
FRIRGTQLFLNITPDYEENSMLQAHLECKRGDTVVTQLRVFVSVLDVNDNPPVFPYKTKQ
WGVPEDTKVKATVIPETELEAQDRDRDDILFYTLQEVTPGASDFFSLAGVNRPALQLDRS
LDFDALPRMTFQLLVRDTQEENKQPSHSATATLILEVQPADLRPPWFLPCVYSDGHVCIQ
AQYHGAVPTGHRLPGPLTLRPGPIYAVDGDRGIDERIIYSMVTGHEDGTFSIGADSGNLT
MAKSIPSPQTFVLMVKGEQADGARYSVTQVTVEALDANGSLPRFPESLYRGTVALGSGPG
VAVQDAAAPPQPLRIRAQDPEFPDLNSAITYRITNNSNFRMDGEAVLTSALLMQAGVFYA
EVEATNTVTSGTATTVLEVQVSEQEPSPTGPSGPPTPPETAGTTRPSSSTTAEAPRPPEP
SQGSSTTSSGGGTGPRPSLGTTLRPPATSVPEGPPSTGTSPPPPSASPSGGSATRPSSST
TAEAPQSPEPSQGSSTTSSGGDTGPHPSPGTTLRPPTSSMPGGPPGMGTSPSPPSASPGG
SSAQTSKPGTSLPTSPGSSRNPWSSGTPVNEESSTAAKPISNGDRRFSTVEMAVLGGVLG
ALLLLALIALTVLVHKHYGHRLKCCSGKALEPQPQGFDNKAFLTKDEANWEPAPSPPPSP
APPAPPKPAPPDAEPQEPSPHSPAPSHRVPESPAVAPDGGSPAAVRSILTKERRPEGGYK
AVWFGEDIGAEADVVVLNTPGSEVDGAGDSGSEGGGDEGADAGPGGRGQDAPGTDSIYF
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggggacctggcccctgctgctcctgctgctcgtggccacagcccaggcccaggtctgc
tctgtgaaccagaccttcttcgagatcgaggagaacacgactctcagcgcgcccctgctg
gacatctatgtccccgaggaccagcaggtgaccctcggaccctcgtccactctctttgcc
tttcgcatccgggggactcagctctttctcaacataactccggactacgaggagaactcg
atgctgcaggcacacctggagtgcaagagaggggacactgtggtgacccagctgagggtg
tttgtgtctgtgctggatgtcaacgacaacccgcccgtgtttccctacaagaccaagcaa
tggggggtgcccgaggacaccaaagtgaaagccaccgtcatccctgagacggagctggag
gcccaggaccgggacagagatgacatcttgttctataccctccaggaagtgacaccgggt
gccagtgacttcttctccttggcgggcgtaaaccgcccagccctgcagctggaccggtca
ctggacttcgatgcgttgccaaggatgaccttccagctgctggtccgggacacacaggag
gagaacaagcagcccagccactcggccacagccaccttgattctggaggtgcagcctgca
gacctgcggcccccctggttcctgccttgcgtctactcagatggtcacgtctgcatccaa
gcccagtaccacggggctgtgcccacaggccacagactgccaggccccctcaccctgcga
ccggggcccatctacgccgtggacggagaccggggcatcgacgagcgtatcatctacagc
atggtcacgggacatgaggacggcacgttctccatcggtgccgactcgggcaacctcacc
atggccaagagcatccccagcccccagaccttcgttctgatggtcaagggggagcaggcg
gacggcgctcgctactcggtgacccaggtcacggtggaggccctggacgccaacgggagc
ctgccccgcttcccggagagcctgtaccgcggcaccgtggcgctgggctccgggccgggc
gtggcagtccaggatgcagccgccccgccccagcctctgaggatccgggcccaggaccct
gagttccccgacctcaactcggccatcacgtaccgaatcaccaacaattccaacttccga
atggacggggaggccgtgctgaccagcgccctgctgatgcaggctggggtcttctacgca
gaggtggaggccacgaacacggtgacctcaggcacagcgaccacggtcctggaggttcaa
gtctcggaacaggagcccagccccacaggcccctcaggcccccccacacccccagagact
gcaggaacgaccagaccctcgagcagcaccactgcggaagctccccggccccctgagccc
tcgcaggggtcctccacgaccagctctggggggggcactggcccacgcccctccctggga
acaactctgaggccacctgccacctccgtgcctgaggggccccccagtacgggaaccagc
ccccctcccccatcagcctcacccagtgggggctcagcgaccagaccctcgagcagcacc
actgcggaagccccccagtcccctgagccctcgcaggggtcctccacgaccagctctggg
ggggacactggcccgcacccctctccaggcacaactctgaggccacctacctcctccatg
cctggggggccccccggtatgggaaccagcccctcccccccatcagcctcacccggcggg
agctcagcacagacctcaaagccaggaacctctctgccgacatcccctgggtccagcagg
aacccctggtcctcagggacgccggtgaacgaagaaagcagcactgcagcgaagccaatc
tcaaacggggacaggcgcttctcgactgtggagatggcggtgctaggcggggtgctgggc
gcgctgctccttctggctctgatcgccctcacggtccttgtccacaagcactatggccac
cgactcaagtgctgctccggcaaagctctggagccccagccccaaggctttgacaacaag
gctttcctcaccaaagatgaggccaactgggagcccgcccctagtcccccacccagccct
gccccgccagcacccccaaagcccgcacccccagatgctgagccccaagagccttcgccc
cacagccccgcgccctctcaccgtgtccctgagtcccctgcggtagccccggatgggggc
agcccggcagccgtgaggtccatcctgaccaaggagcggcggcctgagggcggctacaag
gctgtgtggttcggggaggacattggggctgaggccgacgtggtggtcctcaacacgcca
ggctcggaggtggatggcgccggcgactcgggcagcgagggcggtggcgacgagggtgca
gacgcgggcccgggcggccgtggccaggacgccccgggcactgactccatctacttctag
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