Sus scrofa (pig): 100514572
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Entry
100514572 CDS
T01009
Symbol
PHF2
Name
(RefSeq) lysine-specific demethylase PHF2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100514572 (PHF2)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100514572 (PHF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
Alginate_lyase2
JmjC_2
PHD_4
Motif
Other DBs
NCBI-GeneID:
100514572
NCBI-ProteinID:
XP_020943838
Ensembl:
ENSSSCG00000008080
UniProt:
A0A4X1UNV0
F1SUD5
LinkDB
All DBs
Position
3:42988607..43078811
Genome browser
AA seq
1107 aa
AA seq
DB search
MATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS
TLKKKRTWHKHSPGQTPDVKPVQNGSQLFIKELRSRTFPSAEDVVARVPGSQLTLGYMEE
HGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNLTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPASANISLYERWQSASNHSEMFFADQVD
KCYKCTLKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSL
TQFPNFETACWYMGKHLLEAFKGSHKSGKQLPPHLVQGAKILNGAFRSWTKKQALAEHED
ELPEHFKPSQLIKDLAKEIRLSENASKASRPEVTAAVSSDEVCFGDREKEEPPSPIEASP
PRSFLEKVSKKKTPKTVKMPKPSKVPKPPKPPKPPKSLKLKDGGKKKGKKCRGPASPTIP
NLDLLEAHTKEALTKIEPPKKGKATKNVLSVPNKEVISTQNDVERLEIREQTKSKSEAKW
KYKNSKPDSLLKMEEEQKLEKSPLAGNKDTKFSFSFSNKKLLGSKTLKPQPSPGVFGALQ
NFKEDKPQPVRDEYEYVSDDGELKIDEFPIRRKKNAPKRDLSFLLDKKEPLPTPTSKPKL
DSALYKQSDDSSDEGSLHIDTDTKPARNAKVKKDGGGSAAGILDLLQASEEVGALEYNPN
SQPPASPSTQEAIQGMLSMANLQASDSCLQTAWGAGQAKGSSLAAHGPRKNGAGGKSAGK
RLLKRTAKNSVDLDDYEEEQDHLDACFKDSDYVYPSLESDEDSPVFKSRSKKRKGSDDAP
YSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKNRKKKNTKRKLAPNT
TSPSASVTTLAGTTSASTTSASTTSASTTSASTTSASTTPASTTPASTSTASSQASQEGS
SPEPLPESHSSSLVDHEYTAAGAFAGAQAGRSSQPMAPGVFLTQRRPSSSSPNNTAAKGK
RTKKGMATAKQRLGKILKIHRNGKLLL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgcccgtgtactgcgtctgccggctcccctacgacgttacccgcttcatg
atcgagtgcgacgcctgcaaggactggttccacggcagctgtgttggagtggaggaggag
gaggccccagatatcgacatataccactgcccgaactgcgagaaaactcacgggaagtcc
accttgaagaagaagcggacctggcacaaacacagcccaggacagacacctgacgtgaag
cccgtgcagaacggcagccagctatttatcaaggagttgcggagtcggacctttcccagt
gcagaagacgtggtggcccgagtgccgggcagccagctcacactgggctacatggaagag
catggcttcaccgagcccatccttgtccccaagaaagatggacttggcctggcggtccca
gcccccaccttctatgtcagtgacgttgagaactatgtgggtccagagcgcagtgtggac
gtgacggatgtcaccaagcagaaggactgcaagatgaaactgaaggagttcgtggactat
tactacagcaccaaccgcaagcgagttcttaaccttaccaaccttgagttctctgacacc
agaatgtccagcttcgtggagccacctgacatagtgaagaaactgtcctgggtagaaaac
tactggcctgatgacgcattgctggccaagcccaaggtgaccaagtactgcctgatctgt
gtgaaggacagctacactgacttccacattgactctgggggtgcctctgcctggtaccat
gtgctcaagggggagaagatcttctatctcatcaagccagcttcggccaacatctccctg
tacgagcgctggcagtcagcctcaaaccacagcgaaatgttctttgccgaccaggtggac
aagtgctacaaatgcaccctcaagcagggccagacactcttcatcccctcaggctggatt
tatgccacgctcacgcctgtggactgcctggccttcgcgggacatttcctccacagcctg
agcgtggagatgcagatgagagcatatgaagtggagaggaggttgaaactgggcagccta
acccaatttcccaatttcgaaactgcctgctggtacatggggaagcacctgctggaggca
ttcaaaggttctcacaaatctgggaagcagctgccccctcatttagtccaaggagctaaa
attctcaatggtgctttccgatcatggacgaaaaagcaggctttggcggagcacgaggac
gagctcccagagcacttcaaaccctcgcagctcatcaaagacctcgccaaagagatccgg
ctcagtgagaatgcctccaaggcctcccgacccgaagtgacagcagcagtctcctcggat
gaggtctgttttggggaccgggagaaggaggagcccccatcccccattgaggccagccct
cctcggtccttcctggagaaggtgtccaaaaaaaagactcctaaaaccgtgaagatgccc
aagccgtccaaagttcccaagcccccgaagccccccaagcctcccaaatcactgaagctc
aaggacgggggcaagaagaaggggaagaagtgccggggcccggcttcacccaccatcccc
aacctggacctgctggaggcccacaccaaggaggcactgaccaagatcgagcctcccaag
aaaggcaaggccacaaagaatgtcctgagtgtgcccaacaaggaggtgatcagcacacag
aatgacgtggagaggttggaaatccgagagcaaaccaagagcaagtcagaggccaagtgg
aaatacaagaacagcaaacctgattccctgctgaagatggaggaagagcagaagctggag
aagtctcctctggcaggaaacaaggacaccaagttctcattttccttctccaacaagaaa
ctcctgggctccaagaccctcaagccacagccaagcccaggggtgttcggggccttgcag
aacttcaaggaggacaagccccagccagtccgggacgagtatgagtatgtgtcggatgac
ggggagctcaagatcgatgagtttcccatccgaaggaagaagaatgctccgaagagggac
ttgtccttcttactggacaagaaggagccgctgcccacacccacttcgaagccaaagctg
gactcagcgctctacaagcagagcgacgactcctctgatgagggctcgcttcacatcgac
acggataccaagcccgcccgcaacgccaaagtgaagaaggatggtgggggttcagctgcg
ggcatcctggacctgctgcaggccagcgaggaggttggcgcacttgagtacaaccccaac
agccagccccccgcctcccccagcacacaggaagccattcagggaatgctgtccatggcc
aacctgcaggcctccgactcctgcctgcagactgcatggggcgccggccaggccaagggc
agctcgctggcggcccacggcccccgaaagaatggggcaggtggtaagagtgcaggcaag
cggctgctgaagaggacagccaagaacagcgtggacctggatgattacgaggaggagcag
gaccacctggatgcctgcttcaaggactctgactacgtttacccctccctggagtcagat
gaggacagtcctgtctttaagtctcggtccaagaagaggaaaggctcagacgatgctcct
tacagcccaacagcgagggtcggcccatcggtgccaaggcaggacaggcccgtgcgcgag
gggaccagagtggcctccattgagacggggctggcagctgctgcagccaagctgtcccag
caggaggagcagaaaaacagaaagaaaaagaacaccaaaaggaagctggctcccaacacc
acctccccctccgcctctgtcaccaccttggcaggcaccacctcggccagcaccacctcg
gccagcaccacctcggcctccaccacttcggcctctaccacttcggcctccaccacccca
gcctcaaccaccccggcctccaccagtacggccagcagccaggcctcacaggagggcagc
tcgcccgagcccctgccagagtcccacagcagcagcctggttgaccacgagtacacggcg
gctggcgcctttgctggggcccaggccggccgttcttcccagcccatggcccctggggtc
ttcctcacacagaggcggccttcctcgtcatcccccaacaacactgctgccaaaggaaaa
cgtacaaaaaagggcatggccaccgccaaacagaggcttgggaaaattttgaaaattcat
cggaacggaaaactactcctttaa
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