KEGG   Sus scrofa (pig): 100514785
Entry
100514785         CDS       T01009                                 
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1 precursor
  KO
K05635  laminin, gamma 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04151  PI3K-Akt signaling pathway
ssc04510  Focal adhesion
ssc04512  ECM-receptor interaction
ssc04518  Integrin signaling
ssc05020  Prion disease
ssc05145  Toxoplasmosis
ssc05146  Amoebiasis
ssc05165  Human papillomavirus infection
ssc05200  Pathways in cancer
ssc05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100514785 (LAMC1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100514785 (LAMC1)
   04518 Integrin signaling
    100514785 (LAMC1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100514785 (LAMC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100514785 (LAMC1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100514785 (LAMC1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100514785 (LAMC1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100514785 (LAMC1)
   05145 Toxoplasmosis
    100514785 (LAMC1)
  09164 Neurodegenerative disease
   05020 Prion disease
    100514785 (LAMC1)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN Laminin_B EGF_Teneurin JAG1-like_EGF2
Other DBs
NCBI-GeneID: 100514785
NCBI-ProteinID: NP_001258644
Ensembl: ENSSSCG00000015555
LinkDB
Position
9:124283668..124405967
AA seq 1608 aa
MSSSTRAAPALRPRGLLWPVLVVLAAATAGCARAAMDECTDEGGRAQRCMPEFVNAAFNV
TVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQHGAAFLTDYNNQADTTWWQSQ
TMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGS
CENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQ
EWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFD
KLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRST
GHGGHCTNCQDNTDGPNCERCRENYFRLGNREACSPCHCSPVGSLSTQCDSYGRCSCKPG
VMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSTDECNVETGRCVCKDNVEGFNCERCKPGF
FNLESSNPRGCTPCFCFGHSSVCTNALGYSVYSITSTFQIDEDGWRAEQRDGSEASLEWS
SERQDIAVISDSYFPRYFIAPAKFLGKQVLSYGQNLSFSFRVDRRDTRLSAEDLVLEGAG
LRVAVPLIAQGNSYPSETTVKYVFRLHEATDYPWRPTLTPFEFQKLLNNLTSLKIRGTYS
ERSAGYLDDVTLASARPGPGVPATWVESCTCPVGYGGQFCEMCLSGYRRETPSLGPYSPC
VLCTCNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTVGTSSDCQPCPCPGGSSC
AVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGN
CNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPV
TGQCECLPHVTGRDCGACDPGFYNLQSGQGCKRCECHALGSTNGQCDVHTGQCECQPGIT
GQHCERCEVNHFGFGPEGCKPCDCHPEGALSLQCKDDGRCECREGFVGNRCDQCEENYFY
NRSWPGCQECPACYRLVKDKVADHRAKLQELENLIANLGTGDEMVTDQAFEDRLKEAERE
VTDLLREAQDVKDVDQNLMDRLQRVNNTLSSQISRLQNIRNTIEETGNLAEQARARVEST
EQLIEIASRELEKAKVAIANVSITQPESTGDPNNMTLLAEEARKLAERHKQEADDIVRVA
KTANDTSTEAYNLLLKTLAGENQTAFEIEELNRKYEQAKNISQDLETQAARVHEEAKKAG
DKAVEIYASVAQLTPVDSEALENEANKIKKEAEDLDRLIDQKLKDYEDLREDMRGKEFEV
KNLLEKGKTEQQTADQLLARADAAKALAEEAAKKGRNTLQEANDILNNLKDFDRRVNDNK
TAAEEALRRIPAINQTIIEANEKTREAQLALGNAAADATEAKNKAHEAERIASAVQKNAT
STKAEAERTFAEVTDLDNEVNNMLKQLQEAEKELKKKQDDADQDMMMAGMASQAAQEAEI
NARKAKNSVTNLLNLINDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSNL
ENEARKQEAAIMDYNRDIEEILKDIRNLEDIRKTLPSGCFNTPSIEKP
NT seq 4827 nt   +upstreamnt  +downstreamnt
atgagcagcagcacgagggccgcgccggcgctgcggccacggggcctcctctggccagtg
ttggttgtgctggcggccgccacggccggctgcgcccgggcagccatggacgagtgcacg
gacgagggcgggcgggcgcaacgctgcatgcccgagttcgtcaacgccgccttcaacgtg
accgtggtggccaccaacacgtgcgggactccgcctgaggagtactgtgtgcagaccggg
gtgaccggggtcaccaagtcctgtcacctgtgcgacgccgggcagccccacctgcagcac
ggggcagccttcctgaccgactacaacaaccaggccgacaccacctggtggcagagccag
accatgctggccggcgtgcagtaccccaactccatcaacctcacgctgcacctgggaaaa
gcttttgacatcacgtatgtgcgcctcaagttccacaccagccgcccagagagcttcgcc
atttacaagcgcacgagggaagacgggccctggatcccgtaccagtactacagcggctcc
tgcgagaacacctactcgaaggcaaaccgcggcttcatcaggacaggaggggacgagcag
caggccctgtgcacggatgaattcagtgacatttctcctctcactgggggcaacgtggcc
ttttcgaccctggaaggacggcccagcgcctacaactttgacaatagccctgtgctgcag
gagtgggtaactgccactgacatcagagtaactcttaatcgcctgaacacttttggagat
gaagtgtttaatgaccccaaagttctcaaatcctattactatgcaatctccgattttgct
gtgggtggtaggtgtaaatgtaacggacatgcaagcgagtgcgtgaagaacgaatttgac
aagctggtgtgtaactgcaaacacaacacttacggtgtagactgtgaaaagtgtcttcct
ttcttcaacgaccggccgtggaggcgggcgactgccgagagcgccagcgaatgcctgccc
tgtgactgcaatggccgatcgcaggagtgctactttgaccctgaactctaccgttccacg
ggccacggtggccactgtaccaactgccaggataacacggatggccccaactgcgagagg
tgccgggagaattacttccgccttgggaacagggaggcctgctctccctgccactgtagt
cctgttggttctctcagcacacagtgtgacagctacggccgatgtagctgtaagccagga
gtgatgggggacaagtgtgaccgttgccagcctgggtaccattctctcactgaggctgga
tgcaggccatgctcttgtaatccttctggcagcacagatgaatgtaatgttgaaacagga
agatgtgtttgcaaagacaatgtcgaaggcttcaattgtgagagatgcaaacctggattt
tttaacctggaatcatctaatcctaggggttgcacaccctgcttctgctttgggcattcc
tctgtctgtacaaatgctcttggctacagtgtttattctataacgtccacctttcagatt
gatgaggatgggtggcgagcagaacaaagggatggctctgaagcatcactcgagtggtcc
tctgagaggcaggatatcgccgtcatctcagatagctactttcctaggtacttcattgct
cctgcaaaattcttgggcaagcaggtgttgagctatggtcagaacctctccttctccttt
cgcgtggacaggcgagacactcgcctgtctgcagaagatctggtgctagagggagctggc
ttaagagtggctgtgcccttgatcgctcagggcaattcctatcccagtgagaccactgtg
aaatacgtcttcaggctccacgaagcaacagattacccttggaggcctactcttacccct
tttgaatttcagaaactcctaaacaatttgacctctctcaagatccgtgggacatacagt
gaaagaagtgctggctatttggatgatgtcaccctggcgagcgctcgtcctgggcctggg
gtccctgcaacctgggtggaatcctgcacctgtcccgtgggatacggagggcagttttgt
gagatgtgcctctcaggttacagaagagaaactccgagtcttgggccatacagtccttgc
gtgctttgtacctgcaatgggcacagtgagacctgtgaccccgagacaggtgtttgtaac
tgcagagacaacacagccgggccccactgtgagaagtgtagtgacgggtactatggcgat
tccaccgtgggcacctcctctgattgccagccctgtccatgtcctgggggctccagttgt
gctgttgtccctaagacacaggaggtggtgtgcaccaactgtcctactggtaccaccggt
aagagatgtgagctctgtgatgatggctactttggagaccctctgggtaggaatggccct
gtgaggctctgccgcctgtgccagtgcaatgacaacatcgatcccaatgcagttggaaac
tgcaaccgcttgacgggagaatgcttgaagtgcatctacaacacagctggcttctattgt
gaccggtgcaaagacggattttttggaaaccccctggctcccaatcccgcagacaaatgc
aaagcctgtgactgtaacccctatgggaccgtaaagcaacagagcagctgcaaccctgtg
accgggcagtgcgagtgtctgcctcacgtgaccggccgggactgcggagcttgtgaccct
ggattctacaacctgcagagcgggcagggctgcaagaggtgtgagtgccatgccttgggt
tccaccaatggacagtgtgacgtccacactggccagtgtgagtgccagcctggcatcact
ggccagcactgtgagcgctgcgaggtcaaccactttgggtttggacctgaaggctgcaaa
ccctgtgactgtcatcccgagggggctctttccctccagtgcaaagacgatggtcgctgt
gaatgcagagaaggctttgtggggaaccgctgtgaccagtgcgaagagaactatttctac
aatcggtcttggcctggctgccaggaatgtcccgcgtgttaccggctggtgaaggataag
gtcgctgaccatcgagcaaaactccaggaattagagaatctcattgcaaaccttggaact
ggggatgagatggtgacggaccaagcctttgaggatagactgaaggaagcagagcgagag
gtgaccgacctccttcgagaggcccaggatgtcaaagatgtagaccagaatttaatggat
cgcctccagagagtgaataacaccttatccagccaaattagccgtttacagaatatccgc
aataccattgaggagaccggaaacttggctgagcaagcacgtgcccgggtagaaagcaca
gagcagttgattgaaattgcttccagagaactggagaaagcaaaggttgccattgccaac
gtgtcgatcactcagccagagtctacaggggacccaaacaacatgactcttttggcagaa
gaggcacgaaagcttgctgagcgccataaacaagaagctgatgacatcgtacgagtggca
aagacagccaatgatacatcaactgaggcatataatctgcttttgaagaccctggcagga
gaaaatcaaacagcttttgagattgaagagctgaatagaaagtatgaacaagcgaagaac
atctcacaggatctagagacacaagccgcccgagtccatgaggaggccaaaaaggctggt
gacaaagccgtggagatctatgccagtgttgcccagctgacacctgtggactcagaagca
ctggagaatgaggcaaataaaataaagaaagaagctgaggatctggatcgtctgattgac
cagaagttaaaagattatgaggacctcagagaggacatgagagggaaggaatttgaagta
aagaaccttctggagaaaggaaagacggaacagcagactgctgaccaactcctagccaga
gctgatgctgccaaggctcttgcggaagaagctgctaaaaagggacgaaatactttacaa
gaagccaatgacattctcaacaacctgaaagattttgatagacgagtaaatgataacaag
acggctgcagaggaggccctaaggagaatccctgccatcaaccagaccataatcgaagcc
aatgaaaagaccagggaagcacagctggctctgggcaacgctgccgcagatgccactgag
gccaagaacaaggcccacgaggcagaaaggattgccagcgctgtccaaaagaatgctacc
agcaccaaggcagaagctgaaaggacttttgcagaagttacagatctggataatgaggtg
aataatatgttgaaacaactacaggaagcagaaaaggagctaaagaaaaaacaagatgat
gctgaccaggacatgatgatggcagggatggcttcacaggctgctcaggaagccgagatc
aatgccagaaaggccaaaaactctgttaccaacctcctcaaccttattaatgacctcttg
gagcagctggggcagctggacacagtggacctgaacaagctcaatgagattgaaggcacc
ctgaacaaagccaaagatgaaatgaaagtcagtgatctcgacaggaaggtgtccaacctg
gagaatgaagccaggaagcaggaggctgccatcatggactataacagagacattgaggaa
atcctcaaggacatccgcaacctggaagacatcaggaagaccttgccctccggctgcttc
aacaccccgtccatagagaagccctag

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