Sus scrofa (pig): 100514873
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Entry
100514873 CDS
T01009
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100514873 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100514873 (BHLHE40)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
100514873 (BHLHE40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
WsaF_C
Motif
Other DBs
NCBI-GeneID:
100514873
NCBI-ProteinID:
NP_001231939
Ensembl:
ENSSSCG00000011534
UniProt:
A0A287BEM0
A0A8D1S8S2
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All DBs
Position
13:61526121..61533686
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AA seq
412 aa
AA seq
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MERIPSAQPPPACLPKAPGLEPGDLPGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGTSRKPADPAPKVMDFKEKPSSLAKGSEGPGKNCVPVIQRTFPHSSGEQSGSDTD
TDSGYGGESEKSELRVEQPYFKSDHGRRFTMGERISAIKQESEEPPTKKSRMQLSDDEGH
FTSSDLISSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAA
ALTSFMNPDKITAPLLMPQRLPSPLPPHPAIDSSALLQALKQIPPLNLETKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatacccagcgcgcagccgccccccgcttgcctgcccaaagcaccaggactg
gagcctggagacctaccagggatggattttgcccacatgtatcaagtgtacaagtcgagg
cggggaataaagcggagcgaggacagcaaggagacttacaaactgccgcaccggctcatc
gagaaaaagagacgtgaccggattaacgagtgcatcgcccagctgaaggatctcctcccc
gaacatctcaaacttacaactttgggtcacttggaaaaagcagtggttcttgaacttacc
ttgaagcatgtgaaagcactaacgaacctaattgatcagcaacaacagaaaatcattgcc
ctgcagagcggtttgcaagctggtgatctgtcggggagaaatgtcgaagcaggtcaagag
atgttctgctcaggtttccagacctgtgcccgggaggtgcttcagtacttggccaagcat
gagaatactcgggacctgaaatcttcgcagctggttacccacctccaccgcgtggtctcc
gagctcctgcaaggtggtacctccaggaagccagcagacccagctcccaaagtgatggac
ttcaaggagaaacccagctccctggccaaaggctctgaaggcccaggcaaaaactgtgtg
ccagtcatccagcggactttccctcactcaagtggtgagcagagtggcagtgacacagac
acagacagtgggtacggaggagaatcagagaagagcgagctgcgggtcgagcagccatac
ttcaaaagtgatcatggacgcaggttcaccatgggagaaaggatcagtgctattaagcaa
gaatccgaagaaccccccacgaaaaagagcaggatgcaactctcagatgatgaaggccat
ttcactagcagtgacctgatcagctccccattcctgggtccacacccacaccagcctcct
ttttgcctgcccttttatctgatcccaccatcagcaactgcctacttgcctatgctggag
aagtgctggtatcccacttccgtcccagtgttatacccaggcctcaacgcctctgctgca
gccctcaccagcttcatgaacccagacaagatcacagcccccttgctcatgccccagaga
ctcccttctcccttgccaccccacccggccatcgactcttctgccctgctccaagctctg
aagcagatcccccctttaaacttagaaaccaaagactaa
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