Sus scrofa (pig): 100515097
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Entry
100515097 CDS
T01009
Symbol
SUPT4H1
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100515097 (SUPT4H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100515097 (SUPT4H1)
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100515097 (SUPT4H1)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100515097 (SUPT4H1)
RNA polymerase I system
100515097 (SUPT4H1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100515097 (SUPT4H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
100515097
NCBI-ProteinID:
XP_003131694
Ensembl:
ENSSSCG00000017639
Vega:
OTTSUSG00000003647
UniProt:
A0A480VIE8
A0A4X1SL69
LinkDB
All DBs
Position
12:complement(34622775..34629681)
Genome browser
AA seq
117 aa
AA seq
DB search
MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI
IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggctctggagacagtgccgaaggacctgcggcatctgcgcgcttgtttgctgtgttcg
ctggtcaagactatagaccagtttgaatatgatggttgtgacaattgtgatgcatacctt
cagatgaaaggtaaccgagagatggtatatgactgcaccagctcttcctttgatggaatc
attgcaatgatgagtccagaggacagctgggtctccaagtggcagcgagtcagtaacttt
aagccgggggtatatgcagtgtcagtcacaggtcgccttccccaaggaatcgtgcgggag
ctgaaaagtcgaggagtggcctacaaatccagagacacagctataaagacctag
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integrated database retrieval system
