Sus scrofa (pig): 100515203
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Entry
100515203 CDS
T01009
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100515203 (PTBP2)
Spliceosome [BR:
ssc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100515203 (PTBP2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100515203
NCBI-ProteinID:
XP_020945813
Ensembl:
ENSSSCG00000006879
ENSSSCG00000006880
UniProt:
A0A8D0YWU3
I3LDE4
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All DBs
Position
4:complement(120961211..121041876)
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AA seq
537 aa
AA seq
DB search
MDGIVTEVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDSKKFKGEDKMDGAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
LRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSL
LGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSL
FTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV
QLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLF
ANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggaattgttactgaggttgcagttggcgtgaagagaggatctgacgaactactc
tcaggcagtgttctcagtagtccaaactctaatatgagcagcatggtggttacagccaat
ggtaatgatagtaaaaaatttaaaggagaagataaaatggatggtgctccttctcgtgta
cttcatattcgaaaattacctggtgaagtgacagaaactgaagttattgctttaggttta
ccttttggtaaggtgaccaacatccttatgctgaaaggaaaaaatcaggcatttttggag
ctagcaacagaggaagcagctataactatggttaattactattctgctgtgacacctcat
cttcgtaaccaaccgatttatatccagtactctaatcacaaagaactaaaaacagataat
acattaaaccaacgtgctcaagcagttcttcaagctgtgacggctgtccagacagcaaat
actcctcttagcggcaccacagttagtgagagtgcagtgactccagcccagagtccagta
cttagaataattattgacaacatgtattaccctgtaacacttgatgttcttcaccaaata
ttttctaagtttggtgctgtattgaagataatcacatttacaaaaaataaccagtttcaa
gctctcctccagtatggtgatccagtaaatgctcagcaagcaaaactagccctagatggt
cagaatatttataatgcttgctgtaccctaaggattgatttttccaaactcgtgaatttg
aatgtaaaatacaacaatgataaaagtagagattatactcgacctgatctcccatctggg
gatggacagcctgcattggacccagctattgctgcagcatttgccaaggagacatctctc
ttagggcttcctgttgcagctgttccaggagctctgagtcctttggctattccaaacgct
gctgcagcagctgctgcagctgctgctggccgagtgggtatgcctggagtctcagctggt
ggcaatacggtcctgttggttagcaatttaaatgaagagatggttacgccccaaagtctg
tttaccctcttcggtgtttatggagatgtgcagcgtgtgaagattttgtacaataagaaa
gacagtgctctaatacagatggcggatggaaaccagtcacaactggccatgaatcatctt
aatggacagaaaatgtatggaaaaattattcgtgttactctgtctaaacatcagactgta
cagctacctcgagagggacttgatgatcaagggctaacaaaagattttggtaattcccca
ttgcatcgttttaagaaacctggatccaaaaattttcagaacattttccctccttctgca
acccttcacctatccaatatccctccttcagtagcagaagaggatctccgaacgctgttt
gctaacactgggggcactgtgaaagcatttaagttttttcaaagagatcacaaaatggct
ctccttcagatggcaacagtggaagaagccatccaggccttgattgatctgcataattat
aaccttggtgaaaaccatcatctgagagtgtctttctccaagtcaacaatttag
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