Sus scrofa (pig): 100515455
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Entry
100515455 CDS
T01009
Symbol
TNPO3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
ssc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100515455 (TNPO3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100515455 (TNPO3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100515455 (TNPO3)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
100515455 (TNPO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
100515455
NCBI-ProteinID:
XP_013846262
Ensembl:
ENSSSCG00000016572
UniProt:
A0A4X1VUH7
A0A8D0I3J9
LinkDB
All DBs
Position
18:19572555..19673165
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AA seq
923 aa
AA seq
DB search
MEGTKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESC
YFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMP
SWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTV
VSLLMTCVEKAGTDEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSN
LHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV
IHGIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFRMRVSDLVKDLIFLIGSMECF
AQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLVEVLEGVVRLPETVHTAVRYT
SIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDHMAQHFNG
LLEIARSLDSFMLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEP
SNGISSDPTVFLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWA
IASTTLDHRDANCSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMNQLGQQLVSQLLHT
CCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHK
QVTSAEECKQVCWALRDFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaagggacaaaaccgacactgcagctcgtgtaccaggcagtgcaggcgctctaccac
gacccagatcccagcggaaaggagcgcgcctccttttggcttggggagctgcagcgttcg
gttcatgcatgggagatttcagatcaattgttacagatccgacaggatgtggaatcatgc
tattttgctgcacagaccatgaaaatgaagattcagacctcattttatgagcttcccaca
gattctcatgcctctttacgggactcattactaacccatatccagaacttgaaagacttg
tcacctgtcattgtaactcagctggctttagcaatagccgaccttgctctacagatgcct
tcctggaagggatgtgtacaaacattggtggaaaaatatagcaatgatgtaacttctctg
ccttttctgctggagatccttacagtgttacctgaagaagtacacagtcgttccttacga
attggagctaaccggcgtacagaaattatagaagatttggccttttattctagtacagtg
gtatctctgttgatgacttgtgtagaaaaagcaggaacagatgagaaaatgcttatgaag
gtctttcgctgtttgggaagttggtttaacttgggagttttggacagtaacttcatggct
aacaataagttactggcactcctttttgaggttttgcaacaggataagacctcatccaac
ctacatgaagctgcttcagactgtgtgtgctcagctctctatgccattgagaatgtggaa
accaacttgccattagccatgcaactttttcaaggagtcctgacattagagactgcctat
catatggctgtggcacgtgaagatttagacaaagttctgaattactgccgtattttcact
gaactatgtgaaacttttcttgaaaaaattgtttgtactccaggccaaggccttggggac
ctacgaactctggaattgcttcttatctgtgcaggacatcctcaatatgaggtagtagaa
atttcctttaacttttggtaccgactaggggagcatttgtacaaaactaatgacgaagtt
attcatggcatcttcaaagcttacattcaaagactgcttcatgccttggctcgccactgc
cagctggaaccagatcatgagggggttcctgaggagactgatgactttggggagtttcgg
atgagagtgtcagacctggtgaaagacttgattttcttgattgggtctatggagtgtttt
gctcagttatattctactctgaaagaaggcaacccaccctgggaggtgacagaagcggtt
ctctttatcatggctgctatagcaaagagtgttgatccggagaacaatccaacactcgtg
gaggtcctagaaggagttgtccgtctcccagagactgtacacacagctgtgcgatacacc
agcattgaactggttggagagatgagtgaagtggtcgatcgaaatcctcagttccttgac
cctgtgttgggctatttgatgaaaggcctgtgtgaaaagcctctggcttctgctgcagcc
aaagccattcataacatttgctctgtctgccgagatcacatggctcagcactttaatgga
ctcctggagatcgcccgttcccttgattccttcatgttgtctccagaagctgctgtgggc
ttactaaaaggaacagcgcttgtcctagccagattacccttggataagattactgaatgt
cttagtgaactatgttctgttcaggttatggcattgaaaaagctgttgtctcaggagccc
agcaatggcatatcctcagatcccaccgtgttcttagatcgccttgcagtaatatttaga
cataccaatcccattgtggaaaatgggcagactcatccttgccaaaaagtcatacaggaa
atatggccagttttatctgaaactctaaataagcatcgggctgataatcggattgtagag
cgttgttgcaggtgcctccgttttgctgttcgctgtgtaggcaaaggatctgcagctcta
cttcagccactggtcacacagatggtgaatgtttaccatgtacatcagcattcctgtttc
ctgtaccttggtagtatccttgtggatgaatatggcatggaagagggctgtcggcaggga
ctactagacatgctccaggcactgtgtatccccacctttcagctcttagaacagcagaat
ggtcttcagaatcaccctgacaccgtggatgacttattcaggctagccaccaggtttatt
cagcgtagccctgttaccttgctgaggagccaagttgtcatccctatcttacagtgggcc
attgcctcaactaccctggatcaccgggatgccaattgcagtgtcatgaggttcctacga
gaccttatccatacaggggtagccaatgatcatgaagaagactttgaattacggaaagaa
ctgattggacaggtgatgaaccagcttggacaacaacttgtaagccagctgcttcacaca
tgctgcttttgtctccccccctataccctaccagatgtggccgaagtgctctgggagatc
atgcaggttgatagaccgactttttgtcgatggttagagaattccttgaaaggtttgcca
aaggagacaaccgtgggagctgtcacagtgacacacaaacaacttacagatttccacaaa
caagtcactagtgccgaggaatgtaaacaagtttgctgggccttgagagacttcaccaga
ttgtttcgatag
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integrated database retrieval system
