Sus scrofa (pig): 100515500
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Entry
100515500 CDS
T01009
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100515500 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100515500 (SMG7)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100515500 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
100515500 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
100515500
NCBI-ProteinID:
XP_003357623
Ensembl:
ENSSSCG00000015558
UniProt:
A0A8D1P6V6
A0A480EIH5
LinkDB
All DBs
Position
9:124696432..124775739
Genome browser
AA seq
1216 aa
AA seq
DB search
MRDWMFLQIVIVAENVSFKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSM
IESLAADGNPGLKSVLSTGRNLSNNCDTGEKPVVTFKENIKPREGNRDQGRSFPPKEVRR
DYSKGITVTKNDGKKDTTKRKTETKKCTLEKLQETGKQSVAVQVKSQTELRKTPVSEARK
TPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQPQPPSQQPLTSLPAQP
TAQSTSQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYPQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKIPEFYW
DSSYSMAGNRAVMSQQANMDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSPFLSLTGFSLNQ
ERYPNNSVFNEVYGKNLTTSSKAELNPTIAPQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYL
SATSSSESSWHQASTPGGSWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGTMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagagattggatgttcttgcagatagtcattgtggcagaaaacgtttcatttaagtcc
cagatgaggaccgggaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaggtctggaca
tccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtaaagtcttcccaattgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtccagctcctgttcctatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcagctcagcttgtcccttcgaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctctactaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaagaccaagtggggtgtttctgacttcatcaag
gcctttataaaatttcacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaaattggaagaacaatttaagaggctgctgttccaaaaagctttcaactct
cagcagttagttcacgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgaaacagaacagcatagttatagccaagatgagcagctgtgttggacacagctg
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaacaagtct
caggaggaatcctacaatgcctatcccctacctgcagtcaaggtctccatggactggctg
agactcagacccagggtctttcaggaagcagtggtagatgaaagacagtacatttggccc
tggctaatttctcttctgaatagttttcatccccatgaagaggatctttcaagtaccaat
gctacaccgcttccagaggaatttgagttacaaggattcttggctttgagaccttctttc
aggaacttggatttttccaaaggccaccagggtattacaggagacaaagagggtcagcag
cgacaaatacggcagcagcgcttgatctctataggcaaatggatcgcagataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagag
ttaatactggaagaccccagtgaagccaaagagaacctcattctgcaagagacatccatg
atagaatccctggctgccgatgggaacccaggactgaagtcagtgctgtctacaggccgg
aatctaagcaacaactgtgacacaggagagaaaccagtggtcaccttcaaagagaacatt
aagccacgagaagggaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactatagcaaaggaataactgtaactaagaatgatggaaagaaggacaccaccaagagg
aaaacagaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagagtgtg
gcagtgcaggtaaaatcacagacagaattaagaaagactccagtgtctgaagccaggaaa
acacctgtaactcaaaccccaagtcaagcaagtaactcccagttcatccccattcatcac
cctggagcctttcctcctcttcccagccggccagggttcccgcccccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctctggaccagggccaatgaaccag
ggacctcaacaaccacagccaccttctcagcaaccccttacatctttaccagctcagcca
acagcacagtctacaagccagttgcaggttcaagctctagctcagcaacagcagtcccct
acaaaagctgtgccagctttggggaaaagccctcctcaccactctggattccagcagtat
ccacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattaggg
aaaatcatgcctgtgaaacagccctactaccttcaaacccaagaccccataaaactgttt
gagccgtcattgcaacctcctgtaatgcagcaacagcctctagagaaaaaaatgaagcct
tttcccatggagccatataaccataatccctcagaagtcaagatcccagaattctactgg
gattcttcctacagcatggctggtaacagagctgtaatgtcacagcaagccaacatggac
cgcaggggcaaacggtccccaggagtcttccgtccagagcaggatcctgtgcccaggatg
ccatttgaggaccccaagggctcccctctgcttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctg
ctgggacctctcgcctctcttcctggacgaagcctctttaaatccttactggagaagccc
tcggagctcatgtcacattcatcccctttcctgtccctcaccggattctctctcaatcag
gaaagatatcccaataacagtgtgttcaatgaggtatatggaaaaaacctgacaaccagc
tccaaagcagaacttaaccctacgattgccccccaggaaacatcactctactcccttttt
gaggggactccgtggtctccatcacttccagccagttcagatcattcaacaccagccagc
caatctcctcattcctccaacccaagcagcctgccaagctcccctccaacacacaaccat
aattctgtcccattctccaactttggacccattgggactccagataacagggataggaga
actgcagatcggtggaaaactgataagccagccatgggtggatttggcattgattatctc
tcagcaacatcatcctctgagagcagttggcatcaggctagcactccaggtggttcctgg
acaggccatggcccctccatggaggattcctctgctgtcctcatggaaagcctaaagtct
atctggtccagttccatgatgcatcctggaccttccgctttggagcagctgttaatgcag
cagaagcagaaacagcagcggggacaaggcaccatgaaccctccacactga
DBGET
integrated database retrieval system
