Sus scrofa (pig): 100515552
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Entry
100515552 CDS
T01009
Symbol
GLIS1
Name
(RefSeq) zinc finger protein GLIS1
KO
K09232
zinc finger protein GLIS1/3
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100515552 (GLIS1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
100515552 (GLIS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
100515552
NCBI-ProteinID:
XP_020952271
Ensembl:
ENSSSCG00000003846
LinkDB
All DBs
Position
6:158672737..158763171
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AA seq
620 aa
AA seq
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MAEARVPLSAHCRAPPATGLHTDLDPPGRGLANPAPSCYLLGSEPSSGLGPPPEAHLPEG
GLKRCCLLGLPPTSSASASPCASSDITSIVRASQTALVTCVNGLRSPPLPGDLGGPPRRA
RSSPASTESHEGSLQLEACRKASFLKQEPADEFSELFGPHQQGLPPPYPLSQLPPGPGLG
GLGLGLAGRGVAGRQACRWVDCCAAYEQQEELVRHIEKSHIDQRKGEDFTCFWAGCVRRY
KPFNARYKLLIHMRVHSGEKPNKCMFEGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQ
KAFSNSSDRAKHQRTHLDTKPYACQIPGCSKRYTDPSSLRKHVKAHSAKEQQVRKKLHTG
PDAEADVLSECLALQQLHASTQLAASDGKGGRALGQELLPGMYPGSITPHNGLASGILPP
MHDVPSRHHPLDATTSSQHHLSPLPTAESTRDGLGPSLLSPMVSPVKGLGPLPLPPSSQS
HSPGGQPFPTLPSKPPYPPFQNPPPQPLPSPQGYQGSFHSIQNCFPYGDCYRSAEPAASG
DGLAGEAHGFNPLRPNGYHSLSAPLAATGYEALAEAPCPTALPPQPSEDVASSGPEDCGF
FPNGAFDHCLSHIPSIYADT
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcgcgtgcccctgtctgcccactgccgggccccgccagccacaggcctg
cacacggacctggaccccccgggccgaggcctcgccaaccccgcaccttcctgctacctt
ctgggcagtgaacccagctctggcctgggccccccacccgaggcccacctccctgaggga
ggcctgaagcgctgctgcctcttgggcctgccccccacctcctcggcctccgcctccccc
tgtgcctcctccgacatcacctccatcgtccgcgcctcccagacagctctggtcacctgc
gtaaatggacttcggagcccccctctgccgggagacctggggggccctcccaggcgggcc
cggtccagccctgcatccaccgagagccacgagggcagtttgcaactcgaagcctgccgg
aaagccagcttcctgaagcaggagccggcggatgagttctcagagctgttcgggcctcac
cagcagggcctgccgcccccctaccccctgtctcagctgccgcccggcccaggcctcgga
ggcctggggctgggcctggcgggcaggggggtggctgggcggcaggcgtgccgttgggtg
gactgctgtgcagcctacgagcagcaggaggagctggtgcggcacatcgagaagagccac
atcgaccagcgcaagggcgaggacttcacctgcttctgggccggctgtgtgcgccgctac
aagcccttcaacgcccgctacaagctgctcatccacatgagggtgcactcgggcgagaag
cccaacaagtgcatgtttgaaggctgcagcaaggccttctcgcggctggagaacctcaag
atccacctgcggagccacacgggcgagaagccatacctgtgccagcacccaggctgtcag
aaggccttcagcaactccagtgaccgtgccaagcaccagcgtacccacctcgacacgaag
ccgtacgcctgtcagattcctggctgctccaagcgctacacagaccccagctccctgcgc
aagcacgtgaaggcccattcagccaaagagcagcaggtgcgtaagaagctgcacacgggc
cccgacgctgaggccgacgtcctgagcgagtgtctggccctgcagcagctccacgcatcc
acacagctggctgccagcgacgggaagggtggccgcgccctgggccaggagctgctccca
ggcatgtatcctggctccatcaccccccataatgggctggcatcaggcatcctgccccct
atgcacgacgtcccttccaggcaccacccactggatgctaccaccagttcccagcaccat
ctgtcccctctgcccacggccgagagcaccagggatgggctgggacccagtctcctctcg
cccatggtcagcccagtgaaggggctcgggccactgccgctgccaccgtcttcccagagc
cattctccagggggccagcccttccccacgctccccagcaagccaccctatcctcccttc
cagaaccctccaccccagcctctgcccagcccgcaaggctaccaaggaagtttccactcc
atccagaattgcttcccctacggggactgctaccggtcagctgagcccgcagccagtggg
gacggactggccggggaggcccatggtttcaaccctctgcggcccaatggctaccacagc
ctcagtgcacctttagctgccacaggctacgaggccctggccgaggccccgtgccccacg
gcgctgccaccacagccatctgaagatgttgcgtccagcggccccgaggactgcggcttc
ttccccaatggggccttcgaccactgcctgagtcacatcccctccatctacgcagacacc
tga
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