Sus scrofa (pig): 100515585
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Entry
100515585 CDS
T01009
Symbol
PAX2
Name
(RefSeq) paired box protein Pax-2 isoform X3
KO
K15608
paired box protein 2
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100515585 (PAX2)
04131 Membrane trafficking [BR:
ssc04131
]
100515585 (PAX2)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100515585 (PAX2)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100515585 (PAX2)
Membrane trafficking [BR:
ssc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
100515585 (PAX2)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100515585 (PAX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
100515585
NCBI-ProteinID:
XP_003359377
Ensembl:
ENSSSCG00000010556
UniProt:
A0A8W4F780
LinkDB
All DBs
Position
14:111822334..111914950
Genome browser
AA seq
447 aa
AA seq
DB search
MEQRAGRAVLKLSLRGDTAAAAALLPLLCLPMDMHCKADPFSAMHPGHGGVNQLGGVFVN
GRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPK
VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHP
TDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRDEVEVYT
DPAHIRGGGGLHLVWTLRDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFER
PSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTG
RDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRFSNPA
LLSSPYYYSAAPRGSAPAAAAAAYDRH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcgcgcgggccgggcagtcctgaagttgagtttgagaggcgacacggcggcg
gcggccgcgctgctcccgctcctctgcctccccatggatatgcactgcaaagcagacccc
ttctccgcgatgcacccagggcacgggggtgtgaaccagctcgggggggtgtttgtgaac
ggcaggcccctgcccgacgtggtgaggcagcgcatcgtggagctggcccaccagggtgtg
cggccctgcgacatctcccggcagctgcgggtcagccacggctgtgtcagcaaaatcctg
ggcaggtactacgagaccggcagcatcaagcctggcgtgatcggcggctccaagcccaaa
gtggcaacgcccaaagttgtggacaagattgctgaatacaagcgacagaaccctactatg
ttcgcctgggagatccgggacaggctcctggcagagggcatctgtgacaacgacacggta
cccagcgtctcttccatcaacaggatcatccggaccaaagttcagcaacctttccacccg
acggatggagccgggaccggagtgactgcccctggccacaccattgttcccagcacggcc
tcccctcctgtttccagcgcctccaacgatccagtaggatcctactccatcaacgggatc
ctggggatccctcgctccaatggcgagaagaggaaacgtgatgaagtcgaggtatacact
gatcctgcccacattagaggaggtggaggtttgcatctggtctggactttaagagatgtg
tccgagggctcagtccccaatggagactcccagagtggcgtggacagtttgcggaagcac
ttgcgagctgacaccttcacccagcagcagctggaagctttggatcgggtctttgagcgt
ccttcctaccctgacgtcttccaggcatcagagcacatcaaatcagaacaggggaacgag
tactccctcccagccctgacccctgggcttgatgaagtcaagtcgagtctatctgcatcc
accaaccccgagctgggcagcaacgtgtcaggcacacagacataccccgttgtgaccggt
cgtgacatggcgagcaccactctgcctggttacccccctcacgtgccccccactggccag
ggaagctatcccacctccaccctggcaggaatggtgcccgggagcgagttctccggcaac
ccgtacagccacccccagtacacggcctacaacgaggcttggagattcagcaaccccgcc
ttactaagttccccttattattatagtgccgccccccggggctccgcccctgccgctgct
gccgctgcctatgaccgccactag
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