Sus scrofa (pig): 100515639
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Entry
100515639 CDS
T01009
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X4
KO
K16499
protocadherin delta 2
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100515639 (PCDH19)
Cell adhesion molecules [BR:
ssc04515
]
Cadherins
Protocadherins
100515639 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF4529
zf-HIT
Motif
Other DBs
NCBI-GeneID:
100515639
NCBI-ProteinID:
XP_013841747
UniProt:
A0A8D0SI83
F1S1M6
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All DBs
Position
X:complement(82031365..82153159)
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AA seq
1145 aa
AA seq
DB search
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYSVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFSESSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSNCLT
ITCPLRCFIKGQNSKCLHCISVSPISEEQDKKAEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPREVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNASANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHDQNEGFHCREE
CRILGHSDRCWMPRNPMPTRSKSPEHVRNIIALSIEATAADVEAYDDCGPTKRTFATFGK
DVSDHPAEERPSVKGRRTVDVTICSPKVNSAIREAGNGCEAISPVTSPLHLKSPLPTKPS
VSYTVALAPPARDLEQYVNNGPSRPSEAEPRGADGEKVMHEVNPILKEGRDKDSPGVKRL
KDIVL
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggagtcactcctgctgccggtgctcctgctgctggctgtattgtggactcaggcggca
gccctcattaacctcaagtactcggtagaagaggagcagcgcgctgggacggtgatcgcc
aacgtggccaaggacgcgcgagaggcgggcttcgcactggacccacggcaggcctctgcc
ttccgtgtggtgtccaactcggctccgcacctggtggacatcaaccccagctcgggcctg
ttagtcaccaagcagaagatagaccgtgacctgctgtgccgccagagccccaagtgcatc
atctcactcgaggtcatgtccagctcaatggagatctgcgtgattaaggtggagatcaag
gacctgaatgacaatgcgcccagcttcccggcggcacagattgagctggagatctcggag
gcggccagcccaggcacacgcattcccctggacagcgcctatgacccagactcgggcagc
ttcggtgtgcagacgtacgagctcacgcctaacgagctattcggcctggagatcaagacg
cgcggcgatggctcacgttttgcagaactcgtggtggagaagagtctggaccgagagacg
cagtcacactatagcttccgcatcactgcgctcgatggcggcgacccgcctcacctgggc
actgttggcctcagcatcaaggtgaccgattccaatgacaacaatccggtgtttggagag
tccacctattccgtgagcgtaccagagaactcacctcccaacacgcccgtcatccgtctc
aacgccagcgacccagacgaaggcaccaatggccaggtagtctactccttctacggctac
gtcaatgatcgcactcgagagctcttccaaattgacccgcacagcggcctggtcacggtc
accggtgccctagactatgaagagggccacgtgtacgaactggacgtgcaggctaaggac
ttggggcccaactccatcccagcacactgcaaggtcactgtcagcgttctggacaccaat
gacaacccccctgtcatcaacctgctgtccgttaacagcgagctggtggaggtgagcgag
agcgcccccccgggctacgtgattgcacttgtgcgggtgtctgatcgggactccggcctc
aatgggcgcgtacagtgccgtttgcttggcaatgtgccctttcggcttcaggagtacgag
agcttctccactatcctggtggacggacggctggaccgcgagcagcacgaccagtacaac
ctcacgatccaggcgcgcgacggcggcgtgcccatgctgcaaagtgccaagtcctttacc
gttcgcatcaccgacgagaacgacaaccacccgcacttctccaagccctactaccaggtc
attgtgcaggagaacaacacgcccggtgcctatctgctctctgtgtcggcccgagacccc
gacctgggtctcaatggtagtgtttcctaccagatcgtgccatcgcaggtgcgcgacatg
cctgtcttcacctatgtctccatcaaccccaactcgggcgatatctatgcgctgcgatcc
ttcaaccacgagcagaccaaggcatttgaattcaaagtgctggccaaggacggcggtctg
ccctcgctgcagagcaatgctaccgtacgggtcatcatcctcgacgtcaatgacaatacc
ccagtcatcaccgccccacccctgataaatggcaccgcggaggtctacatcccccgcaac
tccggcataggctacctggtgaccgttgtcaaagcagacgactacgatgagggtgagaac
ggccgggtcacctatgacatgacggagggcgatcgcggcttctttgaaatagaccaggtc
aatggcgaggtcagaaccactcgcaccttcagcgagagctctaaggcttcctacgaactt
attgtggtggcccacgaccacggcaagacgtctctctccgcctctgcgcttgtcttaatc
tacctgtcccctgctctcgatgcccaagagtcgatgggctcggtgaacttgtccctgatt
ttcattatagccctgggctccattgccggcatcctctttgtcactatgatcttcgtggcg
atcaagtgcaagagagacaacaaagagatccggacctacaactgcagtaattgtttaacc
atcacttgtcccctccgctgttttataaaaggacaaaacagcaagtgtctgcattgcatc
tcggtttctcccattagcgaggagcaagacaaaaaggctgaggagaaagtgagcctgagg
ggaaagagaatcgctgagtactcctatgggcaccaaaagaaatcaagcaagaagaaaaaa
atcagtaagaatgacatccgcctggtaccccgggaggtggaggagacagacaagatgaac
gttgtcagttgctcctccctgacctcatccctcaactatttcgactaccaccagcagacc
cttcctctgggctgccgccgctctgagagcactttcctgaatgtggagaaccagaatacc
cgcaatgccagcgccaaccacatctatcatcactctttcaacagccagggcccccagcag
ccagacctgatcatcaacggcgtgcctctgcccgagactgaaaactattcttttgactcc
aactacgtgaacagccgagctcatttaattaaaagcagctccaccttcaaggacttagag
ggcaacagcctgaaggatagcggccatgaggagagcgaccagactgacagtgagcatgac
gtccagcgcagcctgtattgtgacactgctgtcaatgatgtgctgaacaccagtgtgacc
tccatgggatctcagatgcctgaccatgatcagaatgaaggatttcattgcagggaagaa
tgccggattcttggccactctgacaggtgctggatgccccggaaccccatgcccacccgc
tccaagtcccctgagcacgtgaggaacatcatcgcgctgtccattgaagctactgctgct
gatgttgaagcttatgacgactgcggccccaccaagcggactttcgcaacctttggaaag
gatgtcagcgaccacccagctgaggagaggccctctgtgaaaggcaggaggactgttgat
gtgaccatctgcagccccaaggtcaacagcgctatccgggaggcgggcaatggctgtgag
gctattagccctgtcacttcccctctgcaccttaagagccctctgcctaccaagccttct
gtgtcttacaccgttgccctggcgcccccggcccgcgatctggagcagtatgtcaacaat
ggaccttctcgcccctctgaagctgagccccgtggagctgatggcgagaaagtcatgcat
gaggttaaccccattctgaaggagggccgcgacaaagattctcctggcgtgaagcgtctg
aaggatatcgttctctaa
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