Sus scrofa (pig): 100515652
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Entry
100515652 CDS
T01009
Symbol
ARHGEF28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
100515652 (ARHGEF28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100515652 (ARHGEF28)
Membrane trafficking [BR:
ssc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100515652 (ARHGEF28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
C1_2
PH_13
Ank_2
Ank_4
PHD
Motif
Other DBs
NCBI-GeneID:
100515652
NCBI-ProteinID:
XP_020940100
Ensembl:
ENSSSCG00000024586
UniProt:
A0A481BTZ2
LinkDB
All DBs
Position
2:82760754..83102126
Genome browser
AA seq
1728 aa
AA seq
DB search
MELNCSEVPLYGQMTVYAKFGKNVYLPKDAEFYFIYNGSHQRHIVIAERTADNVLQSSVP
GHGLQETVTVSVCLCSEGYSPVTMGSDAVTYVDNLACRLARLLVTQADRLTASSHQTLLT
PFALTEGALPALDEELVLALTHLELPVGWTVLGNSSLEVSLHRESLLHLAVRWGLTKLSQ
FLLCLPGGIQALALPNEEGATPIDLALRGGHSKLVEDLTNFQGRRSPGFSRVQLSEGASL
QYIHSSETLTLTLNHTADHLVEADIKLFRKYFWDRAFLIKALEEQEARSEEKLDMPSSAA
ESEEEIKNLVSSRSSPGKESVKCVESPVVQLNEGEGQDGLDLDRFSDVLRKSKRPPLLLA
AGRPSDMLNGGDEVYANCMVIDQVGDLDVNYVNIEGITPDTSPESMGSTLGSESSKHILP
TETSSGMYPPHGNKDVILHPEAQRSFMSPSSSYASNLNLSFGLHGFEKEQSHLKRRSSSL
DALDADSEGEGHSAQSHLCHTPVSQSSSRTGLPSGDELDSFETNTEPDFNISRTESLSLS
SSLQLKESLLSGVRSRSYSCSSPKISLGKTRLIRDFTVCNSVEGGVLHPGRCSVLPSLSL
SLSKSVSLLHPCKQRAYSLPEPPREKRIQEEEWDKCIIPAKSESEKYKVSRTFSFLMNRM
TSPRNKSKTKGKDAKDKEKLSRHQFVPGTFSGVLPCWVCDKTLLGKESFQCSNCNANVHK
GCKDAAPPCNKKFQEKYNKNKPQTILGNSSLRDGPPPGLSLHPSSSMPIGLPTGRKEMAS
QVHPLSRSVPGTALESFRRSGTSLESESDGSTWRSRSHSDELFQPMGSSPSTDSLLMEDV
VDSSLWSDLSGDAQELEAESWSLVVDPSFCSKQEKDVIKRQDVIFELMQTEMHHIQTLFI
MSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHRHFFYSMKERRQESCIGNDRNFVINR
IGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRR
GIPECILLVTQRITKYPVLVERILQYTKESTEEQKDLCKALCLIKDMIAAVDLKVSEYEK
KQKWLEILSKIENKTYTKLKNGHVFRKQALMSKERTLLYEGLVYWKTATGRFKDILALLL
TDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHT
NSKEERNAWMRRIQQAVESCPEEEGGKTSESDEERRRAEVRVAKIQQCQEILSNQDQQIC
AYLEEKLHIYAELGELSGFEDVHLEPHLLIKLDPGEPPQAASLLAAALKEAESLQVAVKV
SQVSDACQPPEEGCAEPAVTDVLSSRDAAGSPTASLVTEGTGGRGCWDVDPGTQGVGTDQ
AVSDAGEKVECRSFPGSSQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHKLVLQQQESV
CSGPSFRGSPLQDQEKYRNLEKRREELASIHKLQHQFLQDQQRWHRRCDQQQREQEAKAS
RLQAREQECQAQEELLLRNREELDQQLQEYQQNLERLREGQRLVERERERMRAQQSLLCG
WKHSRQSSLPAAFSPGRMELMELNRSENFCHENSFFINEALVQMSLNTFNKPTPSDATYP
PDISHSDLVRTCGNQVALKTDVSRPSDVNHEPWVAAGPCHQIPPLHQSSKDSCENDLDIS
QTENSPPHDSNPHGPQLQTFIAEAKLSLQRVTTPDGETGDGEENIVYL
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaactgcagcgaagtacctctttatgggcagatgacagtctacgcgaagttt
ggcaaaaatgtctatcttcctaaagatgctgagttctactttatttacaatggatctcat
cagaggcacattgtgattgcagagcgcacggcagataacgttctccagtccagtgttcca
ggccatgggctgcaggagacggtgacggtgtccgtgtgcctctgctcggagggttactcc
ccggtgaccatgggctccgatgctgtgacgtatgtggacaacctggcctgcaggctggct
cgcttgcttgtcacccaagccgatcgcctcacagccagtagccatcagaccttgctgacc
ccgtttgccctgacggagggggcgctgcctgctctggacgaggagctagtgctggccctg
acccatctggagttgccagttggatggactgtcttgggaaattcttcacttgaagtttct
ctccacagagagtcgctgctgcatctggctgtgaggtggggcctcaccaagctttcccag
ttcctcctgtgtctccctgggggaatccaggccttggctttacccaacgaggagggggcc
acgccaatagacttagctttacggggcggacactccaagctggttgaagacctcacaaac
ttccagggcagacgttccccaggcttctcccgagtacagctcagcgaaggtgcctccctg
cagtatattcactcgtcagaaacactgaccctgacgctgaaccacacagccgaccatttg
gtggaggcggatattaaactcttcaggaaatacttttgggatagagcctttctcatcaag
gctcttgaagagcaagaagccaggtccgaggaaaaactagatatgccctccagcgctgca
gaaagcgaagaagagattaagaatttggtgtccagcagatcatcgcctggaaaggagagt
gtaaagtgtgtggaaagcccggtggttcaactgaatgaaggtgaaggccaggacggtcta
gatttggatcgtttctctgatgtcctcagaaaatccaagcgtcctcccctgctccttgct
gctggccgtccttctgacatgctgaatggcggtgatgaagtttatgctaactgcatggtg
atagatcaggttggtgatctggatgttaactatgttaatatagagggaatcactccggat
accagccctgaatccatgggttctactctggggtctgagagcagcaagcacatccttcct
actgaaaccagctctggcatgtaccccccacatgggaacaaggacgtgatactccaccct
gaagcccagcggtctttcatgtcaccatctagctcatatgcttccaatttgaatctttct
ttcggtcttcatggatttgaaaaggaacaaagtcatctaaagagaagaagctccagtctt
gatgccctggatgccgacagtgagggagaggggcactccgcccagtcgcacctttgccac
actccagtgtctcagagttcttcgaggactggccttcctagtggggatgaactggactct
tttgagaccaacactgaaccagattttaatatctccaggactgaatcactttctttatca
agtagcctgcagctgaaggaatcactgctttctggagtccgctcacgttcttattcctgc
tcatcacctaaaatttctttagggaaaacgcgattgatacgtgattttacagtgtgcaat
tcagttgaaggtggtgtgctccaccctggccgttgttccgtccttccgtctctgtctctc
tcactgtctaaatcagtgtctctgcttcatccctgtaagcaaagagcttacagcttaccg
gagccaccaagagaaaaaagaattcaggaagaagagtgggataaatgcatcatacctgcc
aaatcggagtctgaaaaatacaaagtgagccgaacattcagcttcctcatgaacaggatg
accagccctcggaataaatctaagacaaaaggcaaggatgccaaagacaaagagaaactg
agtcgacatcaatttgtccctggaacattctctggggtcctgccgtgttgggtttgtgat
aaaactctcctggggaaagagtcgttccagtgttccaactgtaatgcaaatgtacataag
ggttgtaaagacgccgcccctccatgtaacaagaaattccaagagaaatataacaagaac
aaaccacagaccatccttggaaattcttcattaagagacggcccaccgcctggtctctcc
ctgcacccttcctcctctatgcctattgggttgccaacggggagaaaggaaatggccagc
caggtccacccgctgtccaggagtgtcccaggcaccgccttggaaagcttcaggaggtcg
gggacatccctggagtctgagagtgatggcagcacctggagaagcaggtcccactctgat
gagctgttccagcccatgggttcatctccctccaccgactccctcttaatggaagacgtc
gtggattcgtctctgtggagtgacctcagtggtgacgcccaggagttggaagcagaatct
tggagtctggtggtggacccctcattttgtagtaagcaggagaaggatgtcatcaaaaga
caggacgtcatttttgagctgatgcaaacagaaatgcatcacatccagaccctgttcatc
atgtctgagatcttcaggaaagggatgaaagaggagctgcagctggaccacagcactgtg
gataaaatcttcccctgtttggatgagttactggaaatccacaggcatttcttctatagt
atgaaggagcgaaggcaagaatcctgtattggcaacgacaggaattttgtcatcaaccgc
atcggagatattctagtacaacagttttcagaagaaaatgcaaataaaatgaagaaaata
tatggggaattctgtagccatcacaaagaagctgttagcctctttaaagaactccagcag
aataaaaagttccagaattttattaagctccgaaatagtaatcttttggctcgacgccga
ggaattccagaatgcattctgctggtcactcagcgcattacgaaataccctgtcttggtg
gaaaggatactgcagtacacaaaggagagcactgaagaacagaaagacttatgcaaagct
ctttgcttaattaaagacatgattgcagccgtggatttaaaagtcagcgagtatgagaaa
aaacaaaaatggcttgagatcctaagtaagatcgaaaacaaaacatacaccaagctcaaa
aacggccacgtctttcggaagcaggcgctgatgagtaaagagaggacccttctgtatgag
ggccttgtttattggaaaactgcaacaggtcgtttcaaagatatcctagctctgcttcta
actgatgtgctgctctttttacaagaaaaagaccagaaatacatctttgcagctgttgat
cagaagccgtccgttatttcccttcagaagctcattgctagggaagttgcgaatgaggag
cgaggaatgtttctgatcagcgcttcgtccgctggtcctgagatgtatgaaattcatacc
aactccaaggaggaacggaacgcctggatgagacggatccaacaggcagtagaaagttgc
ccagaagaagaagggggaaagacaagtgaatcagatgaagagaggcgaagagctgaagtc
agagtggccaaaattcagcaatgtcaagaaatactcagtaaccaagaccaacaaatttgt
gcgtatttggaggagaagctgcatatttacgctgaacttggagaactgagtggatttgag
gatgtccatctagagccacacctcctcattaaactggaccccggagagcctccccaggcg
gcctcgttactggcagcagcactgaaagaagctgagagcctgcaggttgcagtgaaggtc
tcccaggtgagcgatgcgtgtcagccccccgaggaaggctgtgcagaacccgctgtgacg
gatgtgctcagttctcgggatgcagcagggtcgcctactgcttcactagtcacagaaggg
acaggaggaagaggctgttgggatgtggatcccgggacccagggtgtgggaaccgaccag
gcggtctctgatgcgggggagaaggtggaatgtagaagtttcccaggttcttcacagtcc
gagattatacaagcgatacagaatttaacccgtctcttgtatagcctgcaggccgccttg
accatccaggacagccacattgagatccacaagctggttctccagcagcaggagagcgtg
tgttctggcccttctttccgaggcagccccttgcaggaccaggagaaataccgcaatctg
gagaagcggcgggaagagctggccagcatccacaagctgcagcatcagttcctacaggac
cagcagcgctggcaccgcaggtgcgaccagcagcagcgggagcaggaggccaaggccagc
cggctgcaagcacgagagcaggagtgccaagcacaggaggagctgctgctgaggaatcgg
gaggagctggaccagcagctccaggagtaccagcagaacctggagcggctacgggagggc
caacgcctggtggagagggaaagagagaggatgcgggcccagcagagcctgctgtgtggc
tggaagcacagccggcagagtagccttcctgcagcattttctccaggaagaatggagctg
atggaacttaatcgatctgagaatttctgtcatgaaaattcattcttcatcaatgaagct
ttagtgcagatgtcacttaacactttcaacaagccgactccatcagatgccacttacccc
ccagatatatcccattctgatttggtcaggacttgtggaaatcaagtagccctcaagacg
gacgtttcccggccctcagatgtcaaccatgaaccgtgggtagctgctgggccctgtcat
cagataccccctctccaccaaagcagcaaagattcttgcgaaaatgatttggacatctct
cagactgaaaactcgcccccccatgactcaaacccacacggccctcagctgcagacgttt
atagcagaagcaaagctaagtctacagagagtgaccacaccagatggggaaactggagat
ggagaagaaaacattgtttacctctga
DBGET
integrated database retrieval system
