Sus scrofa (pig): 100515669
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Entry
100515669 CDS
T01009
Symbol
DSC1
Name
(RefSeq) desmocollin-1 isoform X1
KO
K07600
desmocollin 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100515669 (DSC1)
Cell adhesion molecules [BR:
ssc04515
]
Cadherins
Major cadherins
100515669 (DSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_CELSR2_9th
RET_CLD1
Fibulin_C
UPF0114
Motif
Other DBs
NCBI-GeneID:
100515669
NCBI-ProteinID:
XP_003127928
Ensembl:
ENSSSCG00000003726
UniProt:
A0A8D1AR94
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All DBs
Position
6:complement(115042225..115076097)
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AA seq
897 aa
AA seq
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MAVASAAPGSDFCKQLLFSLLVLILFCDACQKISLQVPSHLPAEALVGKVNLKECLQSAS
LIQSSDPDFRIQEDGSIYTTHDLMLSSEKKSFSILLSDTQREEQKKIAIVLEAGGQKGPE
RHLEDTVLKRSKRRWAPIPCSLMENSLGPFPQHVQQVQSDAAQNYTIFYSISGPGVDKEP
FNLFFINKDTGDIFCTRSIDREQYEQFPLYAYATTADGYAPEYPLPLLFKVEDDNDNAPY
FENKVTIFSVPENCRTGTSVGKVTAIDHDEPDTLHTRLKYKILQQIPDHPKHFSIHPDTG
VITTTTPLLDREKCDTYKLIMEVRDMGGQPFGLFNTGTITISLEDENDNSPYFTETSYFT
EVEENRIDVEILRMAVRDQDLPNTPHSKAIYKILQGNENGNFKISTDPNTNEGVLCVVKP
LNYELNRQIVLQIGVLNEAQFSKAANAQTPTMCTTTVTVKIKDLDEGPECQPSVKVIQSK
DGLPAGKELLGYKAVDPEKGSSEGLRYKKIGDEDNWFEINEHTGNLKTVKVLDRESKFVK
NNQYNVSVIAMDADGRSCTGTLVVFLEDDNDHPPDIREKEVTICRHDKDFAVLEPVDLDG
PDNGPPFQFFLDNAASKLWTIETKDGKTAILRERQNLDYDTYTVPIQVKDRHGFAARHIL
AVRVCDCTTPSDCKMTPKGVRDIKPSNVILGRWAILAMVLGSALLLCILFTCFCVTAKKT
VKKCFPEDVAQQNLIVSNTEGPGEEVMEANMRLPTQTCNICDTSVSVGTLGGQGVKTQQS
FEMVKGGYTLDSSKGGGHQTLESVKGLGQGGMDTGRYGYTEWHSFTQPRLGEKVYLCGQD
EEHKHSEDYVRSYNYEGKGSVAGSVGCCSDRQEEEGLEFLDHLEPKFRMLAKTCVKK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctccgctgccccagggagcgatttctgtaagcagctccttttctctctc
ctggttttaatattattttgcgatgcttgtcagaaaatatctcttcaagttccttctcat
cttccggctgaagcacttgtaggcaaagtgaatctgaaggagtgtctgcagtcagccagt
ctaatccagtcaagtgatcctgacttcagaattcaagaagatggctcaatttacacaaca
catgacctcatgttgtcttctgaaaagaagagtttttccattttactttcggacactcag
agagaggaacagaaaaagatagcaattgttttggaagcaggaggacagaagggtcctgag
agacatctcgaagacacagtcctcaagcgaagcaagaggcgatgggcgcctattccatgt
tcactgatggagaactcactaggtccatttccacagcacgttcagcaggtccaatctgat
gctgcacagaactacaccatcttttactccataagtggaccaggagtcgataaagagccc
ttcaatcttttcttcataaataaagacacgggggatatcttttgtacacgaagcatagac
cgtgagcagtatgaacagtttcctctctatgcctacgcaacaactgctgacggttatgca
cctgagtacccactccccttattattcaaagttgaagatgataatgataatgccccatat
tttgaaaacaaagtgactatctttagtgtgcctgagaattgccgaactggaacttcagtg
ggaaaagtgactgccatagaccacgatgaacctgacacactacatactcgtctgaaatat
aaaatcttacagcagattccagaccatcccaagcatttctccatacatccagacacaggt
gtcatcaccacaactacacctttactggatagagaaaaatgtgatacatacaagttaata
atggaagtgcgagacatgggaggccaacctttcggtttatttaacacaggaacaattact
atttcactcgaggatgaaaacgacaattcaccatattttacagaaacttcttattttaca
gaagtagaagaaaacagaattgatgttgagattttacgaatggcagtacgtgaccaggat
ttgccaaacacacctcactcaaaggccatatacaagatcctacagggaaatgagaatgga
aacttcaaaattagcacagacccaaatacaaatgaaggagttttgtgtgttgtcaagcca
ttgaactatgaacttaatcgccagattgttttgcaaattggtgtacttaacgaagcacaa
ttctctaaagcagcaaatgctcaaacacctactatgtgcacaacaactgtcactgttaaa
attaaagacttggatgagggccccgaatgccaaccatcagtaaaagttattcagagtaaa
gatggcctcccagcgggcaaagaactccttggatacaaagcagtggatccagaaaaaggc
agtagtgagggcttaaggtataagaagataggagatgaagataactggtttgaaattaat
gaacatactggtaacttgaaaaccgtaaaagtgctagatagagaatcaaaatttgtgaaa
aacaaccaatacaatgtttccgtgattgcaatggatgcagatggcagatcttgcaccgga
acattagtagtttttttggaagatgataatgatcacccaccagatatcagagaaaaagaa
gtgacaatttgtcggcatgataaggattttgctgttcttgaacctgtagatctagatgga
cctgacaatgggccaccttttcaattctttctggataatgctgccagcaaactttggaca
atagagacaaaggatggtaaaactgccattcttcgtgagcggcaaaatcttgattatgac
acttatactgtgcctatccaagtaaaagatagacatggttttgcggcaagacacatatta
gcagtgagagtatgtgactgtaccactccctctgactgcaaaatgactcctaaaggtgta
agagatattaagccatcaaatgtaattcttggaagatgggctattcttgccatggtgctg
ggttctgcattgttgctgtgtattctgtttacatgtttctgtgttactgctaagaaaaca
gtaaagaagtgttttccagaagatgtagcccagcaaaacttaattgtgtcaaatactgaa
ggacctggagaagaagtgatggaagcaaatatgagacttcccacacagacatgcaacatt
tgtgacacaagcgtgtctgttggcacacttggtggccagggagtcaaaacacaacaaagt
tttgagatggtcaaaggcggctacactttggattccagcaaaggaggtggacatcagacc
ttggaatctgtcaagggcctaggacagggaggaatggacaccggcagatatgggtacacg
gagtggcacagcttcacccaacctcggcttggcgaaaaggtgtatctgtgcggacaagac
gaggaacacaaacattctgaagactacgttcgctcctataactatgaaggaaaagggtct
gtggctggctcggtaggctgctgcagtgatcggcaggaagaagaggggcttgagtttcta
gatcacctggaacccaaatttaggatgctagcaaagacctgtgtaaaaaaataa
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