KEGG   Sus scrofa (pig): 100515669
Entry
100515669         CDS       T01009                                 
Symbol
DSC1
Name
(RefSeq) desmocollin-1 isoform X1
  KO
K07600  desmocollin 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    100515669 (DSC1)
Cell adhesion molecules [BR:ssc04515]
 Cadherins
  Major cadherins
   100515669 (DSC1)
SSDB
Motif
Pfam: Cadherin Cadherin_pro CADH_Y-type_LIR Cadherin_CELSR2_9th RET_CLD1 Fibulin_C UPF0114
Other DBs
NCBI-GeneID: 100515669
NCBI-ProteinID: XP_003127928
Ensembl: ENSSSCG00000003726
UniProt: A0A8D1AR94
LinkDB
Position
6:complement(115042225..115076097)
AA seq 897 aa
MAVASAAPGSDFCKQLLFSLLVLILFCDACQKISLQVPSHLPAEALVGKVNLKECLQSAS
LIQSSDPDFRIQEDGSIYTTHDLMLSSEKKSFSILLSDTQREEQKKIAIVLEAGGQKGPE
RHLEDTVLKRSKRRWAPIPCSLMENSLGPFPQHVQQVQSDAAQNYTIFYSISGPGVDKEP
FNLFFINKDTGDIFCTRSIDREQYEQFPLYAYATTADGYAPEYPLPLLFKVEDDNDNAPY
FENKVTIFSVPENCRTGTSVGKVTAIDHDEPDTLHTRLKYKILQQIPDHPKHFSIHPDTG
VITTTTPLLDREKCDTYKLIMEVRDMGGQPFGLFNTGTITISLEDENDNSPYFTETSYFT
EVEENRIDVEILRMAVRDQDLPNTPHSKAIYKILQGNENGNFKISTDPNTNEGVLCVVKP
LNYELNRQIVLQIGVLNEAQFSKAANAQTPTMCTTTVTVKIKDLDEGPECQPSVKVIQSK
DGLPAGKELLGYKAVDPEKGSSEGLRYKKIGDEDNWFEINEHTGNLKTVKVLDRESKFVK
NNQYNVSVIAMDADGRSCTGTLVVFLEDDNDHPPDIREKEVTICRHDKDFAVLEPVDLDG
PDNGPPFQFFLDNAASKLWTIETKDGKTAILRERQNLDYDTYTVPIQVKDRHGFAARHIL
AVRVCDCTTPSDCKMTPKGVRDIKPSNVILGRWAILAMVLGSALLLCILFTCFCVTAKKT
VKKCFPEDVAQQNLIVSNTEGPGEEVMEANMRLPTQTCNICDTSVSVGTLGGQGVKTQQS
FEMVKGGYTLDSSKGGGHQTLESVKGLGQGGMDTGRYGYTEWHSFTQPRLGEKVYLCGQD
EEHKHSEDYVRSYNYEGKGSVAGSVGCCSDRQEEEGLEFLDHLEPKFRMLAKTCVKK
NT seq 2694 nt   +upstreamnt  +downstreamnt
atggctgtggcctccgctgccccagggagcgatttctgtaagcagctccttttctctctc
ctggttttaatattattttgcgatgcttgtcagaaaatatctcttcaagttccttctcat
cttccggctgaagcacttgtaggcaaagtgaatctgaaggagtgtctgcagtcagccagt
ctaatccagtcaagtgatcctgacttcagaattcaagaagatggctcaatttacacaaca
catgacctcatgttgtcttctgaaaagaagagtttttccattttactttcggacactcag
agagaggaacagaaaaagatagcaattgttttggaagcaggaggacagaagggtcctgag
agacatctcgaagacacagtcctcaagcgaagcaagaggcgatgggcgcctattccatgt
tcactgatggagaactcactaggtccatttccacagcacgttcagcaggtccaatctgat
gctgcacagaactacaccatcttttactccataagtggaccaggagtcgataaagagccc
ttcaatcttttcttcataaataaagacacgggggatatcttttgtacacgaagcatagac
cgtgagcagtatgaacagtttcctctctatgcctacgcaacaactgctgacggttatgca
cctgagtacccactccccttattattcaaagttgaagatgataatgataatgccccatat
tttgaaaacaaagtgactatctttagtgtgcctgagaattgccgaactggaacttcagtg
ggaaaagtgactgccatagaccacgatgaacctgacacactacatactcgtctgaaatat
aaaatcttacagcagattccagaccatcccaagcatttctccatacatccagacacaggt
gtcatcaccacaactacacctttactggatagagaaaaatgtgatacatacaagttaata
atggaagtgcgagacatgggaggccaacctttcggtttatttaacacaggaacaattact
atttcactcgaggatgaaaacgacaattcaccatattttacagaaacttcttattttaca
gaagtagaagaaaacagaattgatgttgagattttacgaatggcagtacgtgaccaggat
ttgccaaacacacctcactcaaaggccatatacaagatcctacagggaaatgagaatgga
aacttcaaaattagcacagacccaaatacaaatgaaggagttttgtgtgttgtcaagcca
ttgaactatgaacttaatcgccagattgttttgcaaattggtgtacttaacgaagcacaa
ttctctaaagcagcaaatgctcaaacacctactatgtgcacaacaactgtcactgttaaa
attaaagacttggatgagggccccgaatgccaaccatcagtaaaagttattcagagtaaa
gatggcctcccagcgggcaaagaactccttggatacaaagcagtggatccagaaaaaggc
agtagtgagggcttaaggtataagaagataggagatgaagataactggtttgaaattaat
gaacatactggtaacttgaaaaccgtaaaagtgctagatagagaatcaaaatttgtgaaa
aacaaccaatacaatgtttccgtgattgcaatggatgcagatggcagatcttgcaccgga
acattagtagtttttttggaagatgataatgatcacccaccagatatcagagaaaaagaa
gtgacaatttgtcggcatgataaggattttgctgttcttgaacctgtagatctagatgga
cctgacaatgggccaccttttcaattctttctggataatgctgccagcaaactttggaca
atagagacaaaggatggtaaaactgccattcttcgtgagcggcaaaatcttgattatgac
acttatactgtgcctatccaagtaaaagatagacatggttttgcggcaagacacatatta
gcagtgagagtatgtgactgtaccactccctctgactgcaaaatgactcctaaaggtgta
agagatattaagccatcaaatgtaattcttggaagatgggctattcttgccatggtgctg
ggttctgcattgttgctgtgtattctgtttacatgtttctgtgttactgctaagaaaaca
gtaaagaagtgttttccagaagatgtagcccagcaaaacttaattgtgtcaaatactgaa
ggacctggagaagaagtgatggaagcaaatatgagacttcccacacagacatgcaacatt
tgtgacacaagcgtgtctgttggcacacttggtggccagggagtcaaaacacaacaaagt
tttgagatggtcaaaggcggctacactttggattccagcaaaggaggtggacatcagacc
ttggaatctgtcaagggcctaggacagggaggaatggacaccggcagatatgggtacacg
gagtggcacagcttcacccaacctcggcttggcgaaaaggtgtatctgtgcggacaagac
gaggaacacaaacattctgaagactacgttcgctcctataactatgaaggaaaagggtct
gtggctggctcggtaggctgctgcagtgatcggcaggaagaagaggggcttgagtttcta
gatcacctggaacccaaatttaggatgctagcaaagacctgtgtaaaaaaataa

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