KEGG   Sus scrofa (pig): 100515684
Entry
100515684         CDS       T01009                                 
Symbol
GRIN2C
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2C
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04020  Calcium signaling pathway
ssc04024  cAMP signaling pathway
ssc04080  Neuroactive ligand-receptor interaction
ssc04082  Neuroactive ligand signaling
ssc04713  Circadian entrainment
ssc04720  Long-term potentiation
ssc04724  Glutamatergic synapse
ssc05010  Alzheimer disease
ssc05014  Amyotrophic lateral sclerosis
ssc05017  Spinocerebellar ataxia
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05030  Cocaine addiction
ssc05031  Amphetamine addiction
ssc05033  Nicotine addiction
ssc05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    100515684 (GRIN2C)
   04024 cAMP signaling pathway
    100515684 (GRIN2C)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100515684 (GRIN2C)
   04082 Neuroactive ligand signaling
    100515684 (GRIN2C)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    100515684 (GRIN2C)
   04720 Long-term potentiation
    100515684 (GRIN2C)
  09159 Environmental adaptation
   04713 Circadian entrainment
    100515684 (GRIN2C)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100515684 (GRIN2C)
   05014 Amyotrophic lateral sclerosis
    100515684 (GRIN2C)
   05017 Spinocerebellar ataxia
    100515684 (GRIN2C)
   05020 Prion disease
    100515684 (GRIN2C)
   05022 Pathways of neurodegeneration - multiple diseases
    100515684 (GRIN2C)
  09165 Substance dependence
   05030 Cocaine addiction
    100515684 (GRIN2C)
   05031 Amphetamine addiction
    100515684 (GRIN2C)
   05033 Nicotine addiction
    100515684 (GRIN2C)
   05034 Alcoholism
    100515684 (GRIN2C)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    100515684 (GRIN2C)
Ion channels [BR:ssc04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   100515684 (GRIN2C)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd ANF_receptor SBP_bac_3 NMDAR2_C
Other DBs
NCBI-GeneID: 100515684
NCBI-ProteinID: XP_020922329
LinkDB
Position
12:6385407..6401454
AA seq 1231 aa
MGGALGPALLLTSLLGAWAGPGPGQGEQALTVAVVFGSSGLPQAQARIRLTPQSFLDLPL
EIQPLTVGVNNTNPSSLLTQICGLLGAAHVHGIVFEDNVGTEAVAQILDFISSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYLGWRLLDVLTLELGPGGTRARTQRLLRQIDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPNLALGSTDAPPAVFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HSYRRQHGALPAPAGDCRSHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGILHMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQSNHTFSSGDAAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN
GKHGKRVSGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFTFEYFSPVSYNRNLTSGKKSGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQF
LGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLXVAMGLALLVFAWEHLVY
WKLRHSVPNTSRLDFLLAFSRGIYSCFSGVQSLASPARPPSPDVTASSAQASVLKMLQAA
RDMVTSAGVSSSLDRATRTIESWGGGGGGGRRAPPSPACPGPRPPTPSPAREPSPTGRGP
PGGSRAALGRRVPQPPGGPPTSEPSLPDVSRASGWRAREARWPVRAGAAXRRFSASERRA
LPERPLSPDRCHYSSFPRADRSGRPFLPLFPEPPEPENLPLLGPEQLARREALLRAAWAR
GXRPRHASLPSSVAETFARPSSGPXRCARQACGRLTQAQSMRLPSYREACQEAVWAGALA
WPHGPHACLHAHAHLPLCWGAVCPHLPPCVSHGPWLPAAWRPPGHRDRTLGLSTGYRDSG
GLEEVSRVACGVHGFPRPCAWRRISSLESEV
NT seq 3696 nt   +upstreamnt  +downstreamnt
atgggtggggcccttgggccggccctgttgctcacctcgctccttggggcctgggcaggg
ccaggcccagggcagggcgagcaggctctgacggtggccgtggtgtttggcagctcgggg
ctgccgcaggcccaggcccgtatccgcctgactccgcagagcttcctggacctgcccctg
gagatccagccgctcaccgtgggggtcaacaacaccaaccccagcagtcttctcacccag
atctgcgggctcctgggcgctgcccacgtccacggcatcgtctttgaggacaacgtgggc
acagaggccgtggcccagatcctcgacttcatctcctcccagacccacgtgcctatcctc
agcatcagtgggggctctgctgtggtcctcacccccaaggaaccgggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggagtac
gactggagcgcgttcgccgtcatcaccagcctgcacccgggccacgcgctcttcctcgag
ggcgtgcgtgccgtcgccgacgccagctacctgggctggcggctgctggacgtgcttacg
ctggagctgggccccggcgggacccgcgcgcgcacccagcgcctgttgcgccagatcgac
gccccggtgttggtggcctactgctcacgcgaggaggccgaggtgctcttcgctgaggcg
gcacaggccggcctggtggggcccgggcacgtgtggctggtgcccaacctggctctgggc
agtaccgacgcgccccccgccgtcttccccgtgggcctcatcagcgtcgtcaccgagagc
tggcgcctcagcctgcgccagaaggtccgcgacggcgtggccatcctggccctgggcgcc
cacagctaccggcgccagcacggcgcccttcccgccccggctggggactgccgcagccac
cccgggcccgtcagccctgcccgggaggccttctacaggcacctactcaatgtcacctgg
gagggccgggacttctccttcagccctggtgggtacctggtccagcccaccatggtggtg
atcgccctcaaccggcaccgcctctgggagatggtggggcgctgggaccatggcattctc
cacatgaagtatccggtgtggcctcgctacagcgcctccctgcagcccgtggtggacagc
cggcacctgacggtggccacgctggaagagcgaccttttgtcatcgtggagagccctgat
cctggcactggcggctgcgtgcccaacacggtgccctgccgccggcaaagcaatcacacc
ttcagcagcggtgacgcggcgccctacaccaagctttgctgtaagggcttctgcattgac
atcctcaagaagctggccaaggtggtcaagttctcctacgacctgtacctggtgaccaac
ggcaagcacggcaagagggtgagcggcgtgtggaacggcatgatcggggaggtctactac
aagcgggcggacatggccattggctccctcaccatcaacgaggagcgctccgagatcgtg
gacttctcggtgcccttcgtggagacgggcatcagcgtgatggtggcacgcagcaacggc
accgtctccccctcggccttcctggagccctacagccccgccgtgtgggtgatgatgttt
gtcatgtgtctcaccgtggtggccatcaccgtcttcacgtttgagtacttcagccccgtc
agctacaatcggaacctcaccagtggcaagaagtccggaggcccgtccttcaccattggc
aagtccgtgtggctgctgtgggctctggtcttcaacaactcggtgcccatcgagaacccc
cggggcaccactagcaagatcatggtcctggtctgggccttcttcgccgtcatcttcctc
gccagctacaccgccaacctggccgccttcatgatccaggagcagtacatcgacaccgtg
tctggcctcagtgacaagaagtttcagcggccgcaagatcagtacccacccttccgcttt
ggcacagtgcccaatggcagcacggagcggaacatccgcagcaactaccgtgacatgcac
acccacatggtcaagttcaaccagcgctcggtggaggacgcgcttaccagcctcaagatg
gggaagctggatgccttcatctacgacgccgctgtcctcaactacatggcgggcaaggat
gagggctgcaagctggtcaccattggctccggcaaggtctttgccaccaccggctatggc
atcgccatgcagaaggactcccactggaagcgggccatagacctggcgctcctgcagttc
ctgggggacggggagacccagaagctagagacggtgtggctctcggggatctgccagaac
gagaagaacgaggtgatgagcagcaagctggacatcgacaacatggcaggcgtcttctac
atgctgnctgtagccatggggctggccctgctggtcttcgcctgggagcacctggtgtac
tggaagctgcgccactcggtgcccaacacatcccggctggacttcctgctggctttcagc
aggggcatctacagctgcttcagcggcgtgcagagcctggccagccccgcgcggccgccc
agcccggacgtgacggccagctcagcccaggccagcgtgctcaagatgctgcaggcggca
cgcgacatggtgacctcagcgggcgtgagcagctccctggaccgcgccacgcgcaccatc
gagagctggggcggcggcggcggcggcggccgccgtgcgcccccgtcgcccgcctgcccc
ggcccgcggccacccacccccagtcctgcccgcgagccgagccccacgggtcgggggcca
ccaggcgggagtcgcgccgcgctggggcgcagggtcccgcagcccccgggcggccccccg
acgtccgagccctccctccccgacgtctcgcgggcgtcgggctggcgggcccgggaggcg
cggtggccagtgcgggccggagcggctngccggcgcttctcggcctccgagcggcgcgcg
ctcccggagcgccccctgtcgccggatcgctgccactacagctccttccctcgagccgac
cggtcggggcgccccttcctcccactcttcccggagcccccggagcccgagaacctgccg
ttgctcgggccggagcagctggcccggcgggaggccctcctgcgcgcggcctgggcccgg
gggntgcgcccgcgccacgcttccctgcccagctcggtggccgagaccttcgcccggccc
agctcggggccgncccgctgtgcccgccaggcctgcgggcgcttgacgcaggcgcagtcg
atgcggctgccgtcctaccgcgaggcctgccaggaggcggtgtgggcaggggccctcgcc
tggccgcacggaccgcacgcctgcctccacgcccatgcccacctgccactttgctggggc
gctgtctgccctcacctcccaccctgtgtcagccacggcccctggctccctgcagcttgg
cggcctccggggcacagggacaggaccctagggctgagcacaggctacagggacagtggg
gggctggaagaggtcagcagggtggcctgtggggtgcacggcttcccccgaccttgcgcc
tggaggcggatctccagcttggagtcagaagtgtga

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