Sus scrofa (pig): 100515778
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Entry
100515778 CDS
T01009
Symbol
IFFO1
Name
(RefSeq) intermediate filament family orphan 1 isoform X1
Organism
ssc
Sus scrofa (pig)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
DUF5917
Motif
Other DBs
NCBI-GeneID:
100515778
NCBI-ProteinID:
XP_003126579
Ensembl:
ENSSSCG00000000695
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Position
5:64115695..64129832
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AA seq
563 aa
AA seq
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MNPLFGPNLFLLQQEQQGLAGPLGDPLGGDHLAGGGDLPPAPLAPAGPAPYSPPGPGPAP
PAAMALRNDLGSNINVLKTLNLRFRCFLAKVHELERRNRLLEKQLQQALEEGKQGRRGLA
RRDQAVQTGFISPVRPLGLPLGSRPAAVCTPSARVLGSPARSPAGPLAPSAACHPAPSTS
ASTAYSSSARFMPGTIWSFSHARRLGPGLEPTLVQGPGLSWVHPDGVGVQIDTITPEIRA
LYNVLAKVKRERDEYKRRWEEEYAVRLQLQERVDELQEEAQEADACQEELAMKVEQLKAE
LVVFKGLMSNNLSELDTKIQEKAMKVDMDICRRIDITAKLCDVAQQRNCEDMIKMFQKKL
VPSMGGRKRERKAAVEEDTSLSESDGPRHPDGDEEESAALSINEEMQRMLNQLREYDFED
DCDSLTWEETEETLLLWEDFSGYALAAAEAPGEQPEDSLEKVIKDTESLFKTREKEYQET
IDQIELELATAKNDMNRHLHEYMEMCSMKRGLDVQMETCRRLITQSGDRKSPAFTAVPLS
DPPPPPSEAEDSDRDVSSDSSMR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgttattcggccccaatctcttcctcctccagcaggagcagcagggcctggcc
gggccgctgggggaccccctgggaggtgaccacttggccggaggcggggacttgcctccg
gcgccgctagccccggccggcccggctccctattcgccccccgggccgggcccggcgccc
cccgccgccatggcgctccgcaacgacttgggctccaacatcaacgtgctcaagaccctg
aacctccgcttccgctgcttcctggccaaggtgcacgagttggagcgccgcaaccggctg
ctggagaagcagctgcagcaggcgctggaggagggtaagcagggccggcggggcctggct
cgccgcgaccaggccgtgcagaccggtttcatcagccccgtccggcccctggggctgccc
ctgggctcccggccggccgcagtctgcaccccgtcggcgcgggtgctggggtcgcccgcg
cgctctccggccggccccctcgcgccctccgcggcctgccacccagcgccctccacctcc
gcctccaccgcctactcctcgtcggcccgcttcatgcccggcaccatctggtccttctct
cacgcccgccggctcgggccgggactggagcccacgctggtgcaagggcctggcctgtcg
tgggtgcaccccgacggggtgggcgtccagatcgacaccatcacccccgagatccgcgcg
ctctacaacgtgctggccaaagtgaagcgggagcgggacgagtacaagcggaggtgggaa
gaggagtacgcggtgcggctgcagctgcaggagcgcgtggacgagctccaggaggaagcc
caggaggccgacgcctgccaggaggagctggccatgaaggtggagcagctgaaggccgag
ctggtggtcttcaaggggctcatgagcaacaacctgtcagagctggacacaaagatccag
gagaaggccatgaaggtggacatggacatctgccgccgcatcgacatcaccgccaagctc
tgcgatgtggctcagcagcggaactgcgaggacatgatcaagatgttccagaagaagctg
gtcccgtccatgggggggcggaagcgggagcgcaaggctgccgtcgaggaggacacctcc
ctgtcagagagtgacgggccccgccaccccgacggggatgaggaggagagcgcggccctg
agcatcaacgaggagatgcagcgcatgctgaaccagctgagggagtatgattttgaggac
gactgtgacagcctgacttgggaggagacggaggagaccctgctgctgtgggaggatttc
tcgggctatgccctggccgccgcagaggccccgggagagcagccggaagacagtttggag
aaggtgattaaagacaccgagtccctgttcaaaacccgggagaaagaatatcaggaaacc
attgaccagatagagctggagttggccacggccaagaacgacatgaaccggcacctgcac
gagtacatggagatgtgcagcatgaagcggggcctggacgtgcagatggagacctgccgc
cggcttatcacccagtctggggaccgaaagtctcctgctttcactgcggtcccgcttagc
gacccgccgccaccgccaagcgaggctgaggactccgatcgcgatgtctcatctgacagc
tccatgagatag
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integrated database retrieval system
