Sus scrofa (pig): 100515802
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Entry
100515802 CDS
T01009
Symbol
LRFN1
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100515802 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100515802 (LRFN1)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
SALM family
100515802 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
100515802 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_9
LRR_14
Ig_DSCAM-DSCAML_C
CbiM
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
100515802
NCBI-ProteinID:
XP_020950023
Ensembl:
ENSSSCG00000010704
LinkDB
All DBs
Position
6:complement(47971270..47981532)
Genome browser
AA seq
768 aa
AA seq
DB search
MAPGPFSSALLTLPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIXEGTFVQLHKLVRLDMTSNRLHKLPPXGLFLRSQGPGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
ESAAERRLVAAELTSNSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDGRRVKGTSRSPPRVSHVCSQTNGAGAAQAPPPQD
RYEALREVAAPAAAAVAVEAKATAVETASTEPEVALGRSLGGSATSLCLLPSEETSGEES
RVAAGPRRSRSGALGPPASAPPTLALVPGGAPARSRPQQRYSFDGDYGALFQSHSYPRRA
RRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggccctttctcctcggcgctcctcacgctgccgcccgctgccctgcccttt
ctgctgctcctctgggcgggggcgtctcgaggccagccctgcccgggccgctgcatctgc
cagaatgtggcacccacgctgaccatgctgtgcgccaagaccggcttgctctttgtgccg
ccggccatcgaccggcgcgtggtggagctgcggctcaccgacaacttcatcgcggccgtc
cgccgccgcgacttcgccaacatgaccagcctggtgcacctcaccctctcccggaacacc
atcggccaggtggcggccggcgcctttgcggacctccgcgccctccgcgcgctgcacctc
gacagcaaccgcttggccgaggtccgaggtgaccagctccgcggcttgggcaacctccgc
cacctgattcttggcaacaaccagatccgccgagtggagtcggccgccttcgacgccttc
ctgtccaccgtggaggacctagatctgtcctacaacaacctggaggccctgccgtgggag
gccgtaggccagatggtgaacctgaacaccctcacactggaccacaacctcatcgaccac
atcngcgaaggcacctttgtgcagctccacaaactggttcgcttggacatgacctccaac
cgcctgcataaactgcccccgnacgggctcttcctgaggtcccaaggccccgggcccaag
ccgcccacgccgctcacggtcagcttcggcggcaaccccctgcactgcaactgcgagctg
ctctggctgcggcgcctgacccgagaggacgacctggaaacgtgcgccacccccgagcac
ctcaccgaccgctacttctggtccatccccgaggaggagttcctgtgtgaacctccgctg
atcactcggcaggcgggcggccgggccctggtggtggagggccaggcggtcagcctgcgc
tgccgcgccgtgggtgaccctgagcccgtggtgcactgggtggcacccgatgggcggttg
ctggggaactcgagccggacccgggtccggggggatgggaccctagacgtaaccatcacc
accttgcgggacagcggcaccttcacttgcatcgcctccaacgccgccggggaagccaca
gcaccggtggaggtgtgtgtggtgcctctgcctctgatggcgcccccgccagccgccccg
ccacctctcaccgagcccggctcctcggacatcgccacgcccggccgacctggggccaac
gaatcggcagctgagcgccggctcgtggcggcagagctcacctcgaactcagtgctcatc
cgctggccagcccagaggcccgtgcctggcatccgcatgtaccaggtccagtacaacagc
tccgcagatgactcccttgtctacaggatgatcccatccaccagccagaccttcctggtg
aatgatctggcagcgggccgtgcctacgacctgtgcgtgctggcggtctacgacgacggg
gccacggcgctgccggccacacgagtggtgggttgcgtgcagtttaccaccgcgggggat
ccagcgccctgccgaccgctgagggcgcatttcttgggcggcaccatgatcatcgccatc
gggggcgtcattgtcgcgtccgtcctcgttttcatcgttctgctcatgatccgctacaag
gtctacggcgacggggatggccgccgcgtcaagggcacctccagatcgcctccgcgggtc
agccacgtgtgctcgcagaccaatggcgcaggcgcagcgcaggccccgcccccgcaggac
cgttatgaggcgctgcgcgaggtggctgctccagctgctgcggccgtggcggtcgaggcg
aaggctaccgcagtcgagacggcttccacagagccagaggtggcccttggacgctccctg
ggcggctcggccacctcactgtgcctgctgccgtctgaggaaacctctggggaggagtcc
cgggtcgcggcgggcccccggaggagccgttcgggggccttgggaccgcccgcttcggcg
ccccccacgttagctctggttcctgggggagccccggcccgatcgaggccgcagcagcgc
tactctttcgatggggactacggggcgctcttccagagccacagttacccgcgccgcgcc
cggcggacaaagcgccaccggtccacgcctcacctggacggggccggagggggcgcggcc
ggggaggacggagacctggggttgggctccgccagggcgcgcctggcctttaccagcact
gagtggatgctggagagtaccgtgtga
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integrated database retrieval system
