Sus scrofa (pig): 100516009
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Entry
100516009 CDS
T01009
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100516009 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100516009 (SNX27)
Membrane trafficking [BR:
ssc04131
]
Protein recycling
Others
Others
100516009 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100516009 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
PDZ_2
USP7_C2
SNX17_FERM_C
UBX
RBD
RA_3
SNX17-31_F2_FERM
DarA_N
Ras_bdg_2
Pept_S41_N_bact
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
100516009
NCBI-ProteinID:
XP_003125809
Ensembl:
ENSSSCG00000006619
UniProt:
A0A480XS68
A0A8D0MEL7
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All DBs
Position
4:complement(97533643..97620816)
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AA seq
541 aa
AA seq
DB search
MADEDGEGIHPAAPHRNGGGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDL
IRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKF
VVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLE
EYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQV
YQAIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTVRKW
LFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRT
CEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDVA
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggacggggaagggattcaccccgcagcccctcacaggaacggaggtggc
ggcggcggtggagggtctgggctccactgcgccgggaacggcggcgggggaggcggcggc
ccgcgggtcgtgcgcattgtcaagtccgagtccggctacggcttcaacgtgcggggccaa
gtgagcgagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctgcagcat
gtgagcgccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggaccgc
attctggaggtgaacggcgtgaatgttgagggagcgacccacaagcaggtggtggacctg
atccgagcaggcgagaaggaattgatcttgacagtgttatctgtacctcctcatgaggca
gataatctagatccaagtgacgactcgctgggacaatcattttatgattacacagaaaag
caagcagtgcccatatcggtccccacatacaaacatgtggaacagaatggtgagaagttt
gtggtatacaatgtttacatggcagggaggcagctgtgttctaagcggtaccgagagttt
gccatcctacaccagaacctgaagagggagtttgccaacttcacatttccccgacttcca
gggaagtggccattctctttatcagaacagcaattagatgcccgacgtcgagggttggaa
gaatatttagaaaaagtgtgctcaatacgagtcattggcgagagtgacatcatgcaggaa
ttcctatcagaatcagatgagaactacaatggtgtgtccgacgtagagctgagagtagcg
ttaccagatggaacaacagttacagtcagggttaaaaagaacagtacaacagatcaagta
tatcaggctattgcagcaaaggttggcatggacagtacgacagtaaattactttgcctta
tttgaagtgatcaatcattcctttgtgcgtaagctggcacctaatgaatttcctcataaa
ctctacgtccagaattacacatcagctgtgccaggcacctgcctgactgttcgaaagtgg
ctttttactacagaagaagaaatcctcttaaatgacaatgatcttgctgttacctacttc
tttcatcaggctgttgatgatgtgaaaaaaggttacatcaaagcagaggaaaagtcctac
caattacagaagttgtatgaacaaaggaaaatggtcatgtacctcaatatgctaaggact
tgtgagggctacaatgaaatcatcttcccccactgtgcatgtgactccaggaggaagggg
catgttatcacagccatcagcatcacgcactttaaactgcatgcctgcactgaagaagga
cagctggagaatcaggtaatagcatttgaatgggatgagatgcaacgatgggatacagat
gaagaaggaatggccttctgttttgaatatgcaagaggagagaagaagcctcgatgggtt
aaaatcttcacaccatatttcaattacatgcatgaatgcttcgagagggtgttctgcgag
ctcaagtggagaaaagagaacattttccagatggcgaggtcacagcagagggatgtggcc
acctag
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integrated database retrieval system
