Sus scrofa (pig): 100516036
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Entry
100516036 CDS
T01009
Name
(RefSeq) keratin, type I cuticular Ha3-II
KO
K07604
type I keratin, acidic
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04915
Estrogen signaling pathway
ssc05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
100516036
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
100516036
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100516036
04147 Exosome [BR:
ssc04147
]
100516036
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
100516036
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100516036
Exosomal proteins of other body fluids (saliva and urine)
100516036
Exosomal proteins of colorectal cancer cells
100516036
Exosomal proteins of melanoma cells
100516036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
YwqH-like
Uso1_p115_C
UMP1
DUF7310
ATG14
DUF4677
FliD_C
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
100516036
NCBI-ProteinID:
XP_005653958
Ensembl:
ENSSSCG00000021755
LinkDB
All DBs
Position
12:21235308..21242550
Genome browser
AA seq
404 aa
AA seq
DB search
MPYNCLPNLSCRSSSSSRPCVPSSCQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQ
FLNDRLASYLEKVRQLERDNAELERQIQERSQQQEPLVCPNYQSYFRTIEELQQKILSGK
SENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVE
SLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRR
DVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLT
ETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLE
SEDCKLPSNPCATTNAQPIGHCVSSSCTPCGPRTCFKSCNTFGC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccttacaactgcctgcccaacctgagctgccgctccagctcttcctccaggccctgc
gtgccctccagctgccagggtatcaccctacccggagcctgcaacatccctgccactgtg
agcagcggcaactggttctgcgagggcgccttcaatggcaacgagaaggagaccatgcag
tttctgaacgaccggctggccagctacctggagaaggtgcgccagctggagcgggacaac
gcggagctggagaggcagatccaggagcggtctcagcagcaggagcccctggtgtgtccc
aactaccagtcctacttccggaccatcgaggagctccagcagaagatcctgagtggcaag
tctgagaacgccaggctggtggtgcagattgacaatgccaagctggctgccgatgacttc
aggaccaagtaccagacggagctgggcttgcggcagctggtggagtcagacatcaacagc
ctgcgaaggaccctggacgagctgaccctgtgcaaggctgacctggaggcccaggtggag
tccctgaaggaggagctgctctgcctcaagcagaaccacgagcaggaagtcaactccctc
cggagccagctcggggaccgcctcaacatcgaggtggacgccgctcccaccgtcgacctg
aacagcgtgctcagcgagaccaggagccagtacgaggctctggtggagaccaaccgcagg
gacgtggaggaatggttcgccaggcagaccgaggagctgaacaagcaggtggtgtccagc
tcggagcagctgcagtcctaccaggcggagatcatcgagctgagacgcacggtcaacgcc
ctggaggtggagctgcaggcccagcacaacctgagggactctctggagaacacgctgacg
gagacggaggcccgctacagctcgcagctggcccaggtgcagggcctgatcggcaacgtg
gaggctcagctggcggagatccgggctgacctggagcgtcagaaccaggagtaccaggtg
ctgctggacgtgcgggcccggctggagtgtgagatcaacacgtaccgggggctgctggag
agcgaggactgcaagctgcccagcaacccctgcgccacgaccaacgcacagcctattggg
cactgcgtcagcagttcctgcaccccttgtggccctcgcacctgcttcaagtcctgtaac
acctttgggtgctag
DBGET
integrated database retrieval system