Sus scrofa (pig): 100516080
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Entry
100516080 CDS
T01009
Symbol
NOP2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100516080 (NOP2)
Enzymes [BR:
ssc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
100516080 (NOP2)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100516080 (NOP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
NOP2_rpt
FtsJ
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
Methyltransf_15
BMT5-like
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
100516080
NCBI-ProteinID:
NP_001231175
Ensembl:
ENSSSCG00000000696
UniProt:
F1SLR6
LinkDB
All DBs
Position
5:64106013..64115582
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AA seq
821 aa
AA seq
DB search
MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAAGDENSKRLSSRARKRAAKRRLGSAE
VRETNKSPGARPLPGKLPKGAVQTPSKKGALSLFNAAQGKKRPASAYSSEEEGEEEDSEE
GGVVNEGDLWGSEDSDADMVDDYGANSSSEDEEEDDSEELLPIERAARKQKAQEAVTGSQ
WSEEETEEEEEESPESGPREDDETEGGLQINVDEEEPFVLPLAGEMEQDAQAPDLQRVHK
RIQDIVGVLRDFGTQREEGRSRAEYLQRLRKDLATYYSYGDFLLGKLMDLFPLSELVEFL
EANEVPRPITLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEY
LAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAER
LKSVVGNLHRLGVTNTIISNYDGRQFPKVVGGFDRVLLDAPCSGTGIISKDPAVKTNKDE
KDILRCAHLQKELLLSAIDSVSATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVP
TGLDFGQEGFTRFRERRFHPTLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTGNSAT
STPTNPDLPSPKGEVTPKPERSSQPAKKARVAVQAKQRLQKRQLPKKASFQKQNGVSKGT
GSELSTVSSVTKVQPSSKLQDSKQPAEKAVVVREPKVAGRLKQSPKLQSSKKVAFPKQCV
PPKGMDPEIPPVPSLSKTQDAFKPEDCNQPLGNTTTGAEKVKQQLPEQSFKKTAFQKQNG
TPKGPKTPTMSPRSSSRPPPAKRRKSQSRGSSQPLPSSVDG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaaattggaccctacgaaggagaaacgcgggccgggccgaaaggcccgaaag
cagaaaggtgctgagaccgaactcgtcagattcttgcctgcagctggtgatgaaaattcc
aagaggctgtccagtcgtgctcgaaagagggcagccaagaggaggttgggctctgctgaa
gtccgtgagacaaataaatcccctggggccagaccattgcctggaaagctaccaaaagga
gccgtccagacaccgagtaagaagggagccctgtccttatttaatgctgctcaaggcaag
aagcgcccagcatcagcctatagcagtgaggaggagggagaggaggaagactctgaagag
ggtggtgtggtgaacgagggggacctctggggctctgaggacagtgatgccgatatggta
gatgactatggagccaactccagttcagaggacgaagaagaggatgacagtgaagagttg
ctgcccattgaaagggctgctcgaaagcagaaggcccaggaagctgttactgggagccag
tggagtgaggaggagactgaggaagaggaggaggaatcccctgagtcaggccctagagaa
gatgatgagacagaagggggcctccagatcaatgtggatgaggaggagccttttgtactg
ccccttgctggagagatggagcaggatgcccaggctccagacttgcagcgagttcacaag
cgcatccaagatatagtgggagtgttgcgtgattttgggactcagcgggaggagggtcgg
tctcgtgctgaatatctgcagcggcttcggaaggatttggccacttattactcctacgga
gactttctccttggcaagctcatggacctcttccctctgtctgagctggtggagttcttg
gaagctaatgaggtgcctcggcccatcaccctcaggaccaatacgttgaagacccggcgc
cgagaccttgctcaggcactaatcaatcgtggggttaacctggatcccctgggcaagtgg
tcaaagactggactcgtggtgtatgattcctcggtgcccattggtgctactcctgagtac
ttggctgggcactacatgctacagggtgcgtccagcatgttgcctgtcatggccttggcg
ccccaggaacacgagcggattctggacatgtgttgtgcccctggaggaaagaccagctac
attgcccagctcatgaagaacacgggtgtgattctcgccaacgatgccaatgctgagcgg
ctcaagagtgtcgtgggcaacttgcaccggctgggagtcaccaacaccatcatcagcaac
tacgatgggcgccagttccccaaggtggtggggggctttgaccgagtcctgctggatgct
ccttgcagtggcactgggatcatctccaaggacccagctgtgaagactaacaaggatgag
aaggacattctgcgctgtgctcaccttcagaaggagctgctcctgagtgctatcgactct
gtcagtgccacctccaagacaggaggctaccttgtgtactgcacctgctccatcacggtg
gaagagaatgagtgggtggtagactacgcactgaagaagaggaatgtgcggcttgtgccc
actggcctggacttcggccaggagggctttacccgcttccgggaaaggcgcttccacccc
actctgcgttctacccgccgcttctaccctcacacccacaacatggatggtttctttatt
gccaagttcaagaagttctccaattctatcccccagtcccaaacaggaaattctgcaaca
tcaacccctacaaacccagacttgcccagcccgaaaggggaggtgactcccaagcctgag
cgcagcagccagcctgccaagaaggccagagtggctgtgcaagcaaagcagcggctgcag
aaacggcaacttcccaagaaggcttctttccaaaagcagaatggcgtctccaaagggaca
ggctcagaattgtccactgtgtcttctgtcacaaaggtccaaccttcctccaagctccag
gatagcaagcagccagctgagaaagcagtagtggtcagggaaccaaaggtggctgggaga
ctaaaacagtcacccaaactgcagtcctccaagaaagttgccttcccaaagcagtgtgtt
cctcccaagggcatggacccagaaatccctcctgtgccatccctctccaagacccaggat
gctttcaagcctgaggactgcaatcagccccttggaaacaccaccacaggggctgagaag
gtaaagcagcagttaccagagcaatctttcaagaaaactgccttccagaaacagaatggc
acccccaagggacctaagactcccaccatgtcccctcgcagttctagcaggcccccacca
gcgaagaggagaaaatcgcagtccagaggcagcagccaaccactgccgtcttcagtggat
ggttga
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