Sus scrofa (pig): 100516167
Help
Entry
100516167 CDS
T01009
Symbol
SYNJ2
Name
(RefSeq) LOW QUALITY PROTEIN: synaptojanin-2
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00562
Inositol phosphate metabolism
ssc01100
Metabolic pathways
ssc04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
100516167 (SYNJ2)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
100516167 (SYNJ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100516167 (SYNJ2)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
100516167 (SYNJ2)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
100516167 (SYNJ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Paramyxo_P_V_N
Motif
Other DBs
NCBI-GeneID:
100516167
NCBI-ProteinID:
XP_020942082
LinkDB
All DBs
Position
1:complement(9014206..9109050)
Genome browser
AA seq
1476 aa
AA seq
DB search
MALSKGLRLLGRLEASGESSVLLEARGRGDCLLFEAGTVATLAPEEKEVLKGQYGKLTDA
YGCLGELRLRSGGTFLSFLVLVTGCTSVGRIPEAEIYKITATDFYPLQEEAKEEDRLVAL
KKILNSGVFYFSWPNDGSCFDLTIRTQKQGDASSEWGNSFFWNQLLHVPLRQHQVSCCDW
LLKVICGVVAIRTVYASHKQAKACLISRISCERAGARFHTRGVNDDGHVSNFVETEQTIY
MDDGVSSFVQIRGSVPLFWEQPGLQVGSHHLRLTRGLEANAPAFDRHMVFLKEQYGKQVV
VNLLGSRGGEEVLNRAFKKLLWASCHAGDTPMINFDLHQFAKGGKLEKLENLLRPQLKLH
WDDFDVFTTGENVSPRFQKGTLRMNCLDCLDRTNAVQSFIALEVLHLQLESLGLNSKPIA
DRFVESFKAMWSLNGHSLSKMFTGSRALEGKAKVGKLKDGARSVSRTIQSNFFDGVKQEA
IKLLLVGDVYTEESADRGRMLLDNPALLVTPRILRAMSERQSEFTNFRPVRVAVGTWNVN
GGKQFRSNLLGTAELADWLLDAPALSGVTGPQDDSSPADIFAVGFEEMVELSAGNIVNAS
TTNRKVWGERLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVKTGMGG
KAGNKGAVAIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITQKLSFPMGRNIFSHDY
VFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHEGTIDFGPTY
KYDVGSAAYDTSDKCRTPAWTDRVLWWKKRHPFDKTAGELNLLDNGLDADPKVRHAWSPG
TLKYYGRAELQASDHRPVLAIVEVEVQEVDVGARDRVFQEVSSFQGPLDATVVVNLQSPT
LEERNEFPEDVRLELMQTLGSYGTIVLVRINHGQMLVTFADSHSALSVLDVDGMKVKGRA
VKIRPKTKDWLKGLQEEIIGKRDSLASMSPTANSCLLEETFDFTSLDYESEGDILEDDED
YLVDELNQPVVSDGELGGDELSDAPSSTAVAPPGRSPALTKKKQHPTYKDDADLVELKQE
LEAVGDPRHRSPSRSLSVPNRPRPPHPPQRPPPPTGFTVKKSASDASISSGTHGQYSILQ
TARLLPGAPQQAPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLEAGGGIPGEAPNAIGL
RDQGASKPESTGGMAPLLPRRPAPKVPAIKKPTLRRTGKPASPEEQCGNQAVHFTVGPPE
MSLDAPPLVTVPPVPKPRTLQPGKGAARKPAPDEAPPTAAPPPLEAPPPAPQAPPRRKKS
AXFHLQVLQSNCQLLQGLTCSSPGSDCPPAHQPPGGAPFPQPPFVSPSSASSPEAAGTKN
AKSGAASLLGDYQDPFWSLLHHPNLLNNSWLSKNFDPLDLETRNLERAHAAPPQVSVSPA
QEPPLEHRQKDLGHWVTVSDKDKRTVLQVFDPLAET
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atggctctgagcaaagggctgcggctgctcgggcggctggaggcctcgggggagagcagc
gtcctgctggaggcgcgcggccgcggggactgcctgctcttcgaggccggcacggtggcc
acgctcgctcccgaggaaaaggaggttcttaaaggccagtatggaaagctcacggacgcc
tacggctgcctgggggagctcaggttgcggtctggtggcacctttctgagcttcctggtt
ttggtgacaggctgcacatctgtgggcaggattcccgaagccgaaatctacaaaatcacc
gccactgacttttacccactccaggaagaggccaaggaggaggaccggctcgtggccttg
aagaagatcctcaactcaggggtcttctacttctcgtggcccaacgatggctcctgcttc
gacctcaccatccggacgcagaagcagggcgatgccagctccgagtggggaaactccttc
ttctggaaccagctgttgcacgtgcccctgcggcagcaccaggtgagctgctgcgactgg
ctgctgaaggtcatctgcggcgtggtggccatccgcaccgtgtacgcctcccacaagcag
gccaaggcctgcctcatctcccgcatcagctgcgagcgcgccggcgctcgcttccacacc
cgcggcgtgaacgacgacggccacgtgtccaacttcgtggagacggagcagacgatttac
atggatgatggagtgtcatcttttgtccagatcagaggctccgtcccgctgttttgggag
cagccagggcttcaggtgggctcccatcatctgagactcacccgaggcctggaagccaac
gcccctgctttcgacaggcacatggtgtttctcaaggagcagtatgggaagcaagtggta
gtgaacctgctgggcagcagaggcggagaagaggtgctcaacagagccttcaagaagctg
ctctgggcttcctgccacgccggcgacacacctatgataaactttgacttgcatcagttt
gctaaaggcgggaagctagagaaattggagaacctgctgaggccccagttgaagctgcac
tgggatgactttgatgtgttcaccacgggcgagaatgtaagtccacgttttcagaaaggc
actttgcggatgaactgtctggactgcttggaccgaaccaacgccgtgcagagcttcatt
gccctcgaggtcctccacctgcagctcgagagcctcgggctgaattcaaagcccatcgcc
gaccgcttcgtggagtccttcaaagccatgtggtctctgaatgggcacagcctgagcaag
atgttcacaggcagccgggccctggaaggcaaggccaaggtggggaagctgaaggacggg
gcgcggtccgtgtctcgcacgatccagtccaacttcttcgacggagtgaagcaggaggcc
atcaagctgctgctggttggggacgtctacactgaggagtcggcagacagaggacggatg
ctgctggacaacccggccctgctggtgacccccaggatcctgcgagccatgtcggagcgc
cagtcagagttcacgaatttcaggcctgtgcgcgtggccgtgggcacctggaacgtgaac
ggagggaagcagttcaggagcaatctgctgggcacggccgagttggcagactggttgctg
gacgcgcccgcgctctctggagtcaccggaccacaggatgacagcagcccagctgacata
tttgccgtggggttcgaagagatggtggaattgagcgcagggaatattgtcaatgccagc
accaccaacaggaaggtgtggggtgagcggcttcagaaggccatctcccgctcgcatagg
tacattctcctgacgtcggcacagctggtgggcgtctgtctttatatcttcgtccgtcca
taccacgtcccgttcatcagggatgtggcgattgacacggtgaagacgggcatgggaggg
aaggcgggaaacaaaggcgccgtggccatccgcttccagttccacagcaccagcttctgc
ttcatatgcagccacctgacggccgggcagtcccaggtgaaggagagaaacgaggattac
agggagatcacccagaagctgagtttccccatgggaagaaacattttttctcacgattat
gtgttttggtgcggtgatttcaactaccgcatcgatctcacttacgaagaagtcttctat
ttcgttaaacgccaagactggaagaagcttctggaatttgatcagctacagctgcagaaa
tcaagtggaaaaatttttaaagattttcacgaaggcaccattgactttgggcccacctac
aagtatgatgttggctcggctgcctatgacacaagtgacaagtgccgcacccctgcctgg
acagacagggtcctgtggtggaagaagaggcatccttttgacaaaacagccggagaactc
aaccttctagacaatggcctggatgctgaccccaaagttagacacgcctggtcccctggc
accctcaagtattatggccgagcagagcttcaagcgtctgaccacagacccgtgctggcc
atcgtggaggtggaagtgcaagaagtcgatgtgggtgctcgggacagggtgttccaggaa
gtgtcctctttccagggccccctggacgccaccgtcgtcgtcaaccttcagtcgccgacc
ttggaagagagaaatgagttccccgaggacgtgcgcttggagctcatgcagaccttgggg
agctacggcacaatcgtgctcgtcaggatcaaccatgggcagatgctggtgacttttgcg
gacagtcactcggctctcagcgtcctggacgtggacgggatgaaggtgaaaggcagagct
gtgaagatcagaccgaagaccaaggactggctgaaaggtttgcaggaggagatcattggg
aagcgggacagcctggcctccatgtcgcccacggccaactcctgtctgctggaggagacc
tttgacttcacgagtctggactacgagtcggaaggggatattctcgaagatgacgaagac
tatttggtggacgagctgaatcagcctgtggtctcggacggtgaactgggtggagatgag
ctttctgatgcccccagctctacggcagtggcacctcccggcaggtcgcctgcactcacc
aaaaagaagcagcatccaacctacaaagatgatgctgacctggtggagctaaagcaggag
ctggaagccgtcggggacccccgccaccgctctccaagtaggtctctgtcggttcccaat
aggcctcggccacctcacccaccgcagagaccgccccctccaactggtttcacggtgaaa
aaatccgcttcggatgcgtccatctcctccggtacccacgggcagtactcgattttgcag
acggcaagacttctgcccggagcacctcagcaagcacctaaagctaggaccgggataagt
aagccttataacgtcaagcagatcaaaacgaccaacgcgcaggaggcggaagcagcgatc
cgatgtctcctggaagctggaggaggcatcccgggagaagccccaaacgccataggcctg
agggaccagggagcttccaaaccagagtccacagggggcatggctccgctcctgccccgt
cggccggcacccaaagttcctgccatcaagaagccaaccttgaggagaacaggaaagccc
gcgtcaccggaagaacagtgtgggaatcaggctgtccattttacagtcgggcccccggag
atgagccttgacgcccctcctctagtgacagttcctccggttcccaaaccgagaaccctt
cagcctgggaaaggtgctgcccggaagcccgcgccagacgaggccccgcccacggccgcg
ccgccccctctggaggccccgcctcctgcgccccaggcgcccccgaggaggaagaagtcg
gccnncttccacctgcaggtgctgcagagcaactgccagcttctccagggcctcacctgc
agcagccccggcagcgactgcccccctgcacaccagcctccagggggcgctccctttcca
cagccaccttttgtcagcccttcatcggcctcaagcccggaagcggctggcaccaagaat
gcgaagtcaggggcggcctctcttctgggcgactatcaggatcccttctggagccttctc
catcaccctaacctgttgaataattcctggctttccaagaactttgaccccctggacttg
gagactaggaacctcgaaagggcacacgcagcccccccgcaagtcagtgtgtcacctgcc
caagagccaccgctggagcacagacagaaagacctgggtcactgggtgacagtcagtgac
aaggacaagaggacggtgctgcaggtgtttgacccactggcagaaacatga
DBGET
integrated database retrieval system
