Sus scrofa (pig): 100516194
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Entry
100516194 CDS
T01009
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X4
KO
K27096
liprin-beta
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100516194 (PPFIBP1)
Membrane trafficking [BR:
ssc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100516194 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
Crescentin
PUMA_CC
DUF4407
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
100516194
NCBI-ProteinID:
XP_005664081
Ensembl:
ENSSSCG00000000549
LinkDB
All DBs
Position
5:complement(46031398..46222915)
Genome browser
AA seq
1011 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMEADEKEGLRCQIPDSTAETLVEWLQSQMTNGHLPGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLK
LKLTAVEKDRLDYEDRFRDTEGLMQEINDLRLRVSEMDTEKLQYEKKLKSTKSLMAKLSS
MKIKVGQMQYEKQRMEQKWESLKEELASLKEQLEEKESEVKRLQEKLVCKMKGEGIEILD
RDIEVQKMKKAVESLMAANEEKDRKIEDLRQCLNRYKKMQDTVVQAQGQDDDFEDLLPSS
SFSTLLDVQGFSELEKNLSPTPVMGPPSPDPFNTSAPEEFHTSILQVSIPSLLPASKGLE
TSEKAKLLPKPETPFEENDGKIILGPAAETQLCDSISTSSLQKSSSLDNLKKEPSDGGKE
SAPKPSEDKAPVESSPFGSLPPKAPGHDASVDENPFGTRKARSSFGRGFFKIKSSKRTAS
APNLAETEKETPEHLDLAGVSSRPKDSQGSSPFQMAPPSPDSKKKSRGIMKLFGRLRRSQ
STTFNPDDMSEPEFKRGGTRATAGPRLGWSRDLGQSHSDLDMPFAKWTKEQVCNWLMEQG
LGSYLNSGKHWIASGQTLLQASQQDLEKELGIKHSLHRKKLQLALQALGSEEETNHGKLD
FNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVVSVLHHLSIKRAIQVLR
INNFEPNCLRRRPSDENSITPSEVQQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVL
EPRFNVETMAQLLNIPPSKTLLRRHLATHFNLLIGAEAQHQKRDAMELPDYVLLTATAKV
KPKKLSFSNFGNLRKKKQEDGEEYVCPMELGQASGGTSKKGFKPGLDMRLYDEDDLDRLE
QMEDSEGTVRQIGVFSEGINNLTHMLKEDDMFKDFAARSPSASMTDEDSNV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgacatgttggctgcagcgttggagcagatggatggtattata
gcaggttctaaggccctggaatattccaatgggatttttgattgccagtcccccacctcc
ccattcatgggaagcttgcgagctctgcaccttgtggaagacctgcgtgggttgctggag
atgatggaagcagatgagaaggaaggcttgcgatgccagatcccagactccacagcagaa
acgctcgtcgagtggctccagagtcaaatgacaaatggacacctacctgggaacggagat
gtgtaccaagaaaggctagcacgtttagaaaatgataaagaatccctcgttcttcaggta
agtgtgttaacagaccaggtagaggctcagggagagaagattcgcgatttggagttttgt
cttgaggagcacagagagaagttgaacgccacagaagaaatgctgcagcaggagcttctg
agtaggacatccttagaaacgcagaagttggatctgatggctgaaatatctaacttgaag
ttaaaattgacggctgtagagaaggacagattggattatgaagacagattcagagacaca
gagggactaatgcaggaaatcaatgatttgaggttaagagtcagtgaaatggacactgaa
aaacttcagtatgaaaaaaagctgaaatctactaaatctttaatggcaaaactttctagc
atgaaaatcaaggtgggtcagatgcagtatgaaaagcagcggatggaacaaaagtgggag
tcactaaaggaggaactagcatcgctaaaagaacagctggaagagaaggaatctgaagtt
aaaaggctacaggaaaaattggtttgcaagatgaaaggagaaggaattgaaattcttgat
cgagatattgaagtacaaaaaatgaaaaaggccgtggagtctctgatggcagcaaatgaa
gaaaaggatcggaaaatagaagatcttcgacagtgcctgaacaggtacaagaagatgcaa
gacacagtggtgcaggcccaaggccaagatgatgactttgaagatctgctcccttccagc
tccttctccactttgctggatgtgcagggttttagtgagctggagaaaaacctgtcacct
acgccagtaatgggacctcctagtcctgacccatttaacacaagtgctccagaagagttc
cacaccagcatcttgcaagtttcaatcccatcattattgccagcatctaaaggcttggaa
acttctgaaaaagcgaaattgcttcctaagccagagactccatttgaggagaatgatgga
aaaataatccttggtcctgctgctgaaactcaactgtgcgatagtatttcaacttcaagt
ctgcagaagtctagcagtctggacaatctgaagaaagagccatcagatgggggaaaggag
tctgctccaaagccttcagaggataaagctccggtagaaagcagcccgtttgggagcctt
cctcccaaagctccaggacacgatgcctccgtggatgaaaatccctttggcactcgaaaa
gccagatcctcctttggtcgtggctttttcaaaataaaaagtagcaagaggacagcaagt
gcaccaaacttggctgaaacagagaaggagacacccgagcatttagatctggcaggtgta
tcttctcggccaaaagattcgcaggggagcagtcccttccagatggctccaccatcacca
gattccaaaaagaaatccaggggtatcatgaagctctttggaagacttaggagaagtcaa
tcaactacattcaatccagatgacatgtctgagcctgaattcaaaagaggagggacaagg
gcaactgcagggccccgattgggttggtctcgagatttgggacaatctcacagtgacttg
gatatgccatttgccaagtggaccaaggaacaggtttgcaattggcttatggaacaaggc
ctggggtcctacctgaattctggcaagcactggattgcatctggccaaacactgttgcag
gcttctcaacaagatctagagaaggaacttggaatcaagcattcacttcatcgaaagaag
ctccagctggcactgcaagccctgggatctgaagaagaaactaatcacgggaagctggat
ttcaactgggtcactagatggttggatgatattggtctcccccagtacaagacccagttc
gatgaaggacgggtagatggtcgaatgctccattacatgactgttgatgacttactgtct
ctgaaagttgtaagtgtgctccatcatctcagcatcaaaagggccatccaggtcctgagg
atcaataactttgaaccaaactgtctacggaggcggccgtctgatgagaatagcatcacc
ccatcagaggttcagcagtggaccaatcatcgagtgatggagtggctgcgctctgtggac
ctggccgaatatgcccccaacctcagaggcagtggtgtccatggcgggctcatggttcta
gaacctcgttttaatgtagaaacaatggctcagttattgaacatcccaccaagtaagacc
ctgttgcgaagacacttggccactcatttcaaccttctgattggtgctgaagcccaacac
cagaagcgtgatgccatggagttaccggattatgtacttctaactgccactgccaaagtg
aagccaaagaaacttagcttcagcaattttgggaatctgagaaagaagaaacaggaagat
ggggaagaatatgtttgtccaatggaactgggacaggcatcaggaggtacatctaagaaa
gggtttaagcctggattggacatgcgcctgtatgatgaggatgatctggaccggttggag
cagatggaagattcagaagggacagtgagacagataggtgtattctctgaaggcatcaac
aatctaacgcacatgttgaaagaagatgacatgtttaaagattttgcggcccgttccccc
agcgccagcatgaccgatgaggactcaaacgtctga
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integrated database retrieval system
