Sus scrofa (pig): 100516218
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Entry
100516218 CDS
T01009
Symbol
MGAT5B
Name
(RefSeq) alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X1
KO
K09661
mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [EC:2.4.1.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00510
N-Glycan biosynthesis
ssc00515
Mannose type O-glycan biosynthesis
ssc01100
Metabolic pathways
Module
ssc_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
100516218 (MGAT5B)
00515 Mannose type O-glycan biosynthesis
100516218 (MGAT5B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
100516218 (MGAT5B)
Glycosyltransferases [BR:
ssc01003
]
Glycan extension
Wide specificity
100516218 (MGAT5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_18
DUF1827
Motif
Other DBs
NCBI-GeneID:
100516218
NCBI-ProteinID:
XP_020922215
Ensembl:
ENSSSCG00000017170
ENSSSCG00000026070
UniProt:
A0A4X1UWN1
F1RZ69
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Position
12:complement(4655374..4730098)
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AA seq
792 aa
AA seq
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MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFSLCFLMTSLGGQFSARRPGDSPFTIRTE
VLGGPESRGVLRKMSDLLELMVKRMDTLARLENSSELHRAAGDGRFAVDRFPPGAGLMER
IQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWT
SDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAPRASKPLPKVQAVFRSNLSHL
LELMGSGKESLIFMKKRTKRLTVQWALAAQRLARKLGDVQRDQKQILVHIGFLTEESGDV
FSPRVLKGGPLGEMVQWADILAALYVLGHGLRITVSLKELQSNLGVPPGRGNCPLTMPLP
FDLVYTDYHGLQQMKQHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWN
LNPKQFMTMFPHTPDNSFMGFVSEELNETEKQLIKGGKAGNMAVVYGKDASIWKLQGKEK
FLSILNKYMEVHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGP
APLEAIANGCVFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYN
NSEEFEAAIKAIMGTQVDPYLPYEYTCEGMLERIHAYIQHQDFCAAPGLALPGAQAPRSP
FVLAPNATHLQWARNASLAPGAWPPARSLRAWLAAAGRACTDACLDHGLVCEPSFFPLLN
SQDAFQKLQVPCDSTESEMNHLYPAFAQPGQECFLQKEPLLFSCAGASTKYRRLCPCRDF
RKGQVALCQDCL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagtcaaccccgatgggaagataatggtcagaagatgcctggtcaccctgaga
ccttttcggctttttgtcctgggcatcggcttcttctcactctgcttcctgatgacgtct
ctgggaggccagttctcagcccggcgcccgggggactccccctttaccatccgcactgaa
gtgttgggggggccggagtcccggggtgtcctccgcaagatgagtgacctgctggagctg
atggtgaagcgcatggacacgctggccaggctggagaacagcagcgagctgcaccgggct
gctggggacgggcgcttcgccgtggacaggttcccccccggggccggcctcatggagcgg
atccaggccatcgcccagaacgtctcggacattgccgtgaaggtggaccagatcctgcgc
cacagcctgcttctgcacagcaaggtgtctgaaggccgacgggaccagtgtgaggcgccc
agtgaccccaagttccctgactgctcagggaaggtggagtggatgcgtgcgcgctggacc
tcggacccctgctacgccttcttcggggtcgacggcaccgaatgctccttcctcatctac
ctcagtgaggtcgagtggttttgccccccgctgccctggaggaaccagacggccgccccg
agggcatccaagcccctccccaaagtccaggcagtgttccggagcaatctgtctcacctc
ctggagctgatgggcagcgggaaggagtctctaatctttatgaagaaacgtaccaagcgt
ctcacagtccagtgggcactggctgcccagcgcctggcgcggaagctgggggatgtccag
agggaccagaagcagattctcgtccacatcggcttcctgacggaggagtctggggacgtg
ttcagcccgcgggtgctgaagggcgggcctctgggagagatggtgcagtgggcagacatc
ctggctgccctctatgtcctgggacacggtctgcggatcacagtctccctgaaggagctg
cagagtaacttaggggtgccgccaggccgggggaactgcccgctcaccatgcccctgcct
ttcgacctcgtctacaccgactaccacggcctgcagcagatgaagcagcacatgggactg
tccttcaagaaataccggtgccgcatccgggtcattgacaccttcgggacggaacctgcg
tacaaccacgaggagtacgccacgctgcacggctaccggaccaactggggctactggaac
ctcaaccccaaacagttcatgaccatgttccctcacactccggacaactccttcatgggc
ttcgtgtccgaggagctcaacgagacggagaagcagctcatcaaagggggcaaggccggc
aacatggccgtggtctacggcaaggatgccagcatctggaagctccaggggaaggagaag
ttcctgagcatcctgaacaagtacatggaggtccacggcaccgtgtactacgagagccag
cggccccccgaagtccctgccttcgtgaagaaccacggcctcttgccgcagcccgagttc
cagcagctgctgcgcaaggccaagctcttcatagggtttggcttcccctatgagggccct
gcacccctggaggccatcgccaatggctgtgtcttcctgcagtcccgcttcagcccgccc
cacagctccctcaaccacgagttcttcagaggcaaacccacctccagggaggtgttctcc
cagcacccctacgcggagaacttcattggcaagccccacgtgtggaccgtcgactacaac
aactcagaggagtttgaagcagccatcaaggccatcatgggaacccaggtagacccttac
ctgccctacgagtacacgtgcgaggggatgctggagcgcatccacgcctacatccagcac
caggacttctgtgcagccccaggccttgccctgccaggggcgcaagccccacggagcccc
ttcgtcctggcccccaatgccacccaccttcagtgggcccgcaacgccagcctggccccg
ggggcctggcccccagcgcgctccctccgggcctggctggctgccgctgggagggcctgc
acggacgcctgcctggaccacgggctggtttgcgagccttccttcttccctctgctcaac
agccaggacgccttccagaagctgcaggtgccctgtgacagcaccgagtcggagatgaac
cacctgtacccggccttcgcccagcccggccaggagtgcttcctgcagaaggagcccctg
ctcttcagctgtgccggcgccagcaccaagtaccgccgcctctgtccctgccgagacttc
cgcaagggccaggtggccttgtgccaggactgtctgtga
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