Sus scrofa (pig): 100516229
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Entry
100516229 CDS
T01009
Symbol
TTC28
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100516229 (TTC28)
Cilium and associated proteins [BR:
ssc03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100516229 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_17
TPR_NPHP3
TPR_19
TPR_16
TPR_9
TPR_6
TPR_11
ANAPC5
Motif
Other DBs
NCBI-GeneID:
100516229
NCBI-ProteinID:
XP_020929710
Ensembl:
ENSSSCG00000009968
LinkDB
All DBs
Position
14:complement(45317793..45925026)
Genome browser
AA seq
2479 aa
AA seq
DB search
MEQSLPPAPEPIPGSTLVRSQRHREPESPPAPAPIPLFGAKTVGQRSPDGPMLSKAEFVE
KVRQSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARL
LNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDSLE
PTYQQLQKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSAL
SSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQ
LVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNM
GAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYV
LELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNL
GIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQE
LQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNL
GNFHCSRGEYIQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQD
LALAKDLHDKLSQAKAYCNLGLAFKALLNFSKAEECQKYLLSLAQSLNNSQAKFRALGNL
GDIFICKKDVNGAIKFYEQQLGLAHHVKDRRLEASAYAALGTAYRMIQKHDKALGYHTQE
LEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKLKDPSLEAQVYGNM
GITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYY
EQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAY
GELGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYDTALQYH
QLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSY
SSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQL
YRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAF
ADLLVERQTGQQDSDPYSPVTIDQILEMVNGQRGLVLYYSLAAGYLYSWLLAPGAGILKF
HEHYLGDNTVENPGDFQASSSTALPAATSSTLEQHIASVREALGVESYYSRACASSETES
EAGDIMDQQFEEMNNRLNSVTDPTGFLRMVRRNNLLNRSCQSMTSLVGNTASPIKEGTSS
LPRRQSSLARPPLRALYDLLLAPMEGGLMRSSGPVGRHRQLVLVLEGELYLIPFALLKGS
SSNEYLYERFALIAVPSIRALGPQSKSHLRKPPPAYSSSTSMAAVIGNPKLPSAVMDRWL
WGPMPSAEEEAYMVSELLGCQPLVGSVATKERVMSALTQAECVHFATHISWKLSALVLTP
SMDGNPAGSKSSFGHPYTIPESLRVQDDASDGESISDCPPLQELLLTAADVLDLRLPVKL
VVLGSSQESNSKVTADGVVALTRAFLAAGAQCVLVSLWPVPVAASKMFLHALYSSLLNGL
KASAAXGEAMKVVQSSKAFSHPSNWAGFVLIGNDVKLNSPSSLIGQALTEILQHPERARD
ALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGLP
AAVFFPTSDPGDRLQQCSSTIQSLLGLPNPALQALCKLITASETGEQLISRAVKNMVGML
HQVLVQLQAGEKEQDFASAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGK
QANRRTMHFALQALLALFDSTELPKRLSLDSSSSLESLASAQSVSNTLPLGYQHPPFSPT
GAESIASDAISVYSLSSIASSMSFVSKPEGGSEGGGPRGRQDYDRSKNAYPQRATLPRSQ
LSPQTRPAGSKDEEEYEGFSIISTEPLAAYQENRKTRFSPDHKQSRVGTSGGKVLVSSKG
SISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESNPKLDPQE
LAQKILEETQSHLIAVERLQRGGGQGKGTNPEDGISVPNGAAVFRASETSAFSRPALSHQ
KSQPSPVTSKPKPPARSSSLPKVSSGYSSPTASEASIKESPSQHSSRPSPGSDSQASLTD
QPLFKLKYPSSPYSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAGSARSSPADAPDI
DKLKMAAIDEKVQAVHNLKMFWQSTPQQSTGPVKIFRGTPGTMTSKRDVLSLLNLSPRHN
KKEEAVDKLELKELPSKQHGEMPQKAPPNGHWHAETTSLSTLPLPAGPPAAAPTRPLRLP
SGNGYKFLSPGRFFPSSKC
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcgctgccgccggcgcctgagcccattccggggtcaaccctggtacggagc
caaaggcaccgggagcccgagtcgcctccggcgccggcgccgattcctctctttggtgct
aagactgttggccagagaagtcctgatggaccaatgctgagcaaagctgaatttgttgag
aaagttcgtcagagtaatcaggcctgtcatgatggagatttccacacagctattgttctg
tacaatgaagccctggctgttgaccctcagaactgcatcttatacagcaatagatctgca
gcctatatgaaaatccagcagtatgacaaggcactggatgatgcaatcaaagctcgactt
ctcaatcccaaatggccaaaggcatacttccgacagggtgttgccctccagtacctcgga
cgtcatgccgatgccctggcagcctttgcgtctgggctggcacaggaccccaagagtctc
cagcttctggtggggatggtagaagctgccatgaaatctcccatgagagactccctcgag
cccacttatcagcagcttcagaaaatgaaactggacaagagtccctttgtggtcgtgtct
gtggttgggcaggaactcctgacagctggccaccacggagcctctgtggttgtcttagaa
gctgctctgaagattggcacctgcagcctcaaactgagaggttccgttttctctgcactg
agcagtgcttattggtctcttggaaacacagagaagagcactggatacatgcagcaggac
ttggatgtagccaagaccttaggtgaccagacaggagaatgccgagctcatgggaatctg
ggctctgcattcttctccaaaggaaattaccgggaggctctcactaaccacaggcatcag
ttggtgcttgccatgaaactcaaggatcgagaggcagcttcatcagccctgagcagtctg
ggccacgtatacacagccattggagactaccccaatgccctggccagtcacaaacagtgt
gttcttctggccaagcaatccaaagatgagctttctgaagcccgagaacttggcaacatg
ggagctgtgtatattgccatgggtgactttgagaatgctgtgcagtgccatgagcagcat
ctgaagatagccaaggatctggggaacaagcgagaagaagcccgggcatacagcaatctg
ggcagtgcctatcactatagaagaaactttgacaaggctatgtcttaccacaactatgtc
ctggagctggctcaggagttgatggagaaggccattgagatgcgggcctatgctggcctg
ggccatgctgccaggtgtatgcaggatttggagagggctaaacagtaccatgagcagcag
ctgggcattgctgaggatctcaaggaccgggctgcagagggacgagcatcctccaatctg
ggaatcatacaccagatgaaaggtgattatgatacggcactgaaactccacaagacccac
ctgtgcattgcccaggagctgagcgattatgctgcccagggccgtgcctatgggaatatg
ggcaatgcctacaatgctctgggcatgtatgaccaagcggtcaagtaccaccggcaggag
ctgcagatctccatggaagtgaatgaccgtgcctcacaggcatccactcatggaaacctg
gcagtggcctaccaggccctgggtgcccacgaccgtgccctgcagcactatcagaaccac
ctgaacattgcccgggagctgcgggacatccagagtgaggcccgggctctcagcaacctg
ggcaatttccactgctctcgaggggagtacatccaggctgccccctactatgagcagtac
ctccgccttgctcctgacctccaggacatggaaggagaaggaaaagtctgccacaatctt
ggctatgcccattattgcctcggaaattaccaggaggcagtgaagtactacgagcaggat
ctggccctggccaaagaccttcatgacaaattgagccaagcaaaagcttactgcaacttg
ggcttagcgttcaaggctctgctgaatttcagcaaagctgaagagtgtcaaaagtaccta
ctgtccctagcccagtccctgaataattcccaggctaaatttcgagccctcggaaacctg
ggcgatatattcatctgtaaaaaagatgtaaatggtgcaataaaattctatgagcagcag
ctaggcttggctcaccatgtaaaggacagaagactggaggccagtgcatatgcagccctg
ggcactgcgtaccgtatgatccagaaacatgacaaggccttgggttatcacacgcaggag
ctggaggtgtatcaggaactgagtgacttgccaggagagtgcagagctcatgggcacctg
gcagccgtctacatggccctggggaaatacacaatggcattcaagtgttatgaagagcag
ctggatctggggcagaagctgaaggacccaagtctagaagcccaggtctatggcaacatg
ggcatcaccaagatgaacatgaatgtgatggaagaagctatcggctactttgagcagcag
ttggccatgctacagcagctcagtggaaacgaatctgtcctcgacaggggccgggcttat
ggcaacctgggggattgctatgaggccctgggtgactatgaggaagctatcaagtactat
gaacaatatttatctgtggcccagagtctgaatcgcatgcaggaccaagccaaggcttac
cggggcctaggaaatggacacagggcaatggggagcttgcagcaagcccttgtgtgcttt
gaaaagaggcttgtggttgcccatgagcttggggaggcctttaataaagcccaagcctat
ggagagctgggaagccttcacagccaattagggaattacgaacaagccatttcctgcctt
gaacgccagctgaacattgccagagagatgaaagaccgagctctggaaagtgatgcggcc
tgtggcctagggggtgtttaccagcagatgggggaatacgatacagccctgcagtaccac
cagcttgatctgcagatagcagaggaaaccaacaaccccacgtgccagggccgagcctat
gggaacctcggcctgacctacgaatccctgggcacctttgagagggctgtggtctatcaa
gaacagcacctaagcattgctgcacagatgaacgacttggtggccaagacagtgtcttat
agtagcctcgggaggacccatcatgctttgcagaactattcccaggcagtcatgtactta
caggaaggtttaaggttagcagagcaactgggccgaagagaagatgaagccaaaattcgc
catggtcttggcctctccctttgggcgagtgggaacctggaggaagcccaacatcagctc
tatagggcatcggccttgtttgaaaccatccggcatgaggcacagctgagcacggactac
aaactctccctctttgacctgcagacatcatcctaccaggccttgcagcgggtgctcgtc
agcctgggccatcatgatgaagccctggctgtggcagagagaggacggacaagggcgttt
gcagatctcctggtagaacgacaaacaggacagcaggactctgacccctactccccggtc
accatcgatcagatcttagagatggttaatggccagaggggactagtgctttactattcc
ctggctgcaggctacctgtacagctggctgcttgctcctggggcaggaattttgaagttt
cacgaacactacctgggagataacacagtggaaaaccccggtgacttccaggccagcagc
agcacagcccttccagcagccaccagctcgaccctagagcaacacatcgccagcgtgcgt
gaggccctgggcgtggagtcctactactcgagggcctgtgccagcagcgagacggagagt
gaagccggggacatcatggaccagcagtttgaagagatgaacaacaggctcaattcagtc
actgaccccaccggctttcttcggatggttcgccgcaacaacctcttaaacaggagctgc
cagagtatgaccagcctggttggcaacactgcatcacccatcaaggaggggacctcctct
ctgcccaggaggcagagctcattggccaggccgccgctgcgtgctctgtatgacctactc
ctggcgcccatggaagggggcctgatgcgctccagcggccccgtgggccggcaccggcag
ctggtcctggtgctggaaggagagctctacctcatccctttcgccctcctgaagggaagc
tcctccaacgagtacctctacgaacgcttcgccctcatcgctgtcccctccatccgcgcc
cttggcccacagtccaagtctcatctgaggaagcccccgcctgcctactccagctccacg
tccatggctgccgtcattggcaaccccaagctcccgtcagcagtgatggacaggtggctg
tggggcccgatgccgtcggccgaggaggaggcctacatggtgtcagagctgctgggctgc
cagcccctggtgggcagcgtggccaccaaagagcgggtcatgagtgccctgacccaggct
gagtgcgtccactttgccacccacatctcttggaaactgtcggccttggtcctcacgccc
agcatggatggcaacccggctggcagcaagagctcctttggccacccctacaccatccct
gagtccctgcgagtgcaggacgatgccagcgacggggagagcatctcggactgcccgccg
ctgcaggagctgctgcttacagccgccgatgtcctggacctgcggctgcccgtgaagctg
gtggtcctcggctcctcccaggagtctaacagcaaggtcacagctgacggcgtcgtcgcg
ctaacacgagccttcctggctgctggagcacagtgtgtcctagtgtctttgtggcctgtg
cccgtggccgcttctaagatgttcctccacgccttgtactcgtccctgctaaatggcctg
aaggccagtgcggccnctggcgaggccatgaaggtagtgcagagcagcaaggccttctcg
cacccctccaactgggcagggttcgtgctcatcgggaatgacgtgaagctcaacagtccc
tcctcgctcattggccaggccctcacggagatcctccagcacccagagcgcgctcgggat
gccctgcgagtgctgctgcacctggtggagaagtccctgcagcgcattcagaatgggcag
cgcaacgccatgtatacgtcccagcagagcgtggagaacaaagtgggtggcatccctggc
tggcaggccctcctcactgctgtgggcttccggctggaccccccagccagcggcctgcca
gcagctgtcttcttcccaacctccgacccgggtgatcggctccagcagtgcagtagcacc
atccagtccctgctgggtttgcccaaccctgccctccaagccctgtgcaagctcatcact
gcctcggagacaggcgagcagctcatcagtcgggctgttaaaaatatggttggaatgctc
caccaggtgctggtgcagctgcaggccggtgagaaggagcaggattttgcatcggccccc
atccaggtctccatcagtgtccagctgtggcggctcccaggatgtcatgaattcctggca
gctctaggttttgatctctgtgaagttggtcaggaggaagtaatcctgaaaactgggaaa
caagccaatcgacgaaccatgcactttgcactccaggccctgctcgcactctttgattcc
actgagctgcccaagcgcctcagccttgacagctcgtcctccctggagtctctggcctca
gcccagtctgtttccaacactctgcctttgggctaccaacatcctcccttctctcccact
ggtgcagagagcatagcctccgacgccatctctgtgtacagtctgagttccatcgcctcc
tcaatgagctttgtctccaagcctgagggtgggtcagaaggcggtggtccccgaggacgg
caggactacgaccggtccaagaatgcctacccacagagagccaccctgcctcggagccag
ctgtccccccagacccgccctgcaggcagcaaagatgaagaagaatacgaagggttttcc
atcatcagcactgagcctttggcggcctaccaagaaaacagaaagactcgcttctcacca
gatcacaaacagtcccgagtcgggacatccggagggaaagttttggtgagctccaagggg
agcataagcactccaaattctccagttaaaatgactctgattcctagcccaaactcaccc
ttccaaaaggttggaaaactagcaagttcagacacaggagagtcagatcagtctagcaca
gaaacagatagtactgtgaaatctcaagaagaaagcaacccaaagcttgatccacaagaa
ttggcccagaagatcctagaggagacacaaagtcatctcattgcagtggagcgcctgcag
aggggcggtgggcaaggcaagggtactaatcctgaagatggtatctccgtgcccaatggt
gctgctgtcttcagagcgtcagagacgagtgcattcagcaggcctgccctctcccaccag
aagagtcagccatcaccagttactagcaaaccaaagcccccagccagaagctcttccctg
cccaaggtgagttcaggatacagcagccctaccgcctcagaggcgtccatcaaggaaagc
ccgagccagcacagcagccggccatctcccggctctgactcccaggcttccctgaccgac
cagcctctctttaagctgaagtatcccagctctccatacagtgctcacatttccaaatca
ccaaggaacatgtccccgagctcgggccaccagtctccagctggcagcgcaccgtcccca
gctctgtcctattcctcagctggttctgctcgctcgagtccagctgatgctcctgacata
gacaaactgaaaatggcagccattgacgaaaaggtgcaggctgtccacaacctgaagatg
ttttggcagagcacaccccagcagtccacgggacctgtgaaaatattccgggggacccct
ggcacgatgacgtccaaaagagatgtcctcagtctgttaaacttgtcacctcggcacaac
aagaaggaggaagcagtagacaagctggaactcaaggagctaccctcgaagcaacatgga
gaaatgcctcaaaaagcccctcccaatggacactggcacgcggagaccacctcgctgagc
accctgccgctgcccgctggccctccagccgcagctcccacacgccctctgagacttcct
tctggcaacggctacaagtttttgtccccaggaagattttttccttcctctaaatgttaa
DBGET
integrated database retrieval system
