Sus scrofa (pig): 100516270
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Entry
100516270 CDS
T01009
Symbol
NOB1
Name
(RefSeq) RNA-binding protein NOB1 isoform X1
KO
K11883
RNA-binding protein NOB1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100516270 (NOB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100516270 (NOB1)
03051 Proteasome [BR:
ssc03051
]
100516270 (NOB1)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100516270 (NOB1)
Proteasome [BR:
ssc03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
100516270 (NOB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
DUF7835
Motif
Other DBs
NCBI-GeneID:
100516270
NCBI-ProteinID:
XP_003126949
Ensembl:
ENSSSCG00000002753
UniProt:
F1S396
LinkDB
All DBs
Position
6:17233863..17245451
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AA seq
413 aa
AA seq
DB search
MAPVEHVVADAGAFLQNAALQDIGKNIYTIRDVVSEIRDKATRRRLAVLPYELRFKEPFP
EYVRLVTEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPEKVKVSSSSQHPE
TPLHISGFHLPSKPKRPQETVEHGEPARASEDLEFTSFVFWRNPLPDIDRDLQELLIDGG
GCVPSEEEKEEDGLEEGKDQDSDDDGGGWITPSNIKQIQQELERCSVPKDVRVGCVTTDF
AMQNVLLQMGLHVLAVNGMLIREARSYILRCHGCFKTTSDMSRVFCSHCGNKTLKKVSVT
VSDDGTLHMHFSRNPKVLNPRGLRYSLPAPKGGKYAINPHLTEDQRFPQLRLSRKARQKT
DVFAPDYVAGVSPFAENDISSRSATLQVRDSTLGAGRRRLNPNASRKKFVKKR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtggagcacgttgtggccgatgccggggcttttctgcagaacgcggctctg
caggacatcgggaagaacatctacaccattagggatgtggttagcgagattcgagacaag
gccacgcgcaggaggctcgcggtcctgccctacgagctgcgtttcaaggagcccttcccg
gaatacgtgcggctggtaactgagttttcaaagaaaacgggagactatcccagcctctct
gccacagatatccaagtattggcactcacctaccagttggaagcagagttcgttggggtg
tctcacctaaaacaagaaccagaaaaggtgaaagtgagttcatcgtctcagcacccagaa
actcctctgcacatttctggtttccatctgccctcaaagcctaaacgtccacaagaaaca
gtagaacatggagagccagccagggcgtctgaggacctagaattcacttcctttgtgttc
tggagaaacccgttgcctgacattgatcgtgacctgcaggagctgctgattgacggaggt
gggtgtgttccgagtgaggaggagaaggaagaggacggattggaagaagggaaggaccaa
gacagtgatgacgacgggggcgggtggataacccccagcaacatcaagcagatccagcag
gagctggagcggtgctctgtccccaaggacgtgcgggtcggctgtgtgaccacggacttc
gccatgcagaacgtcctgctccagatggggctgcacgtgctggctgtgaacggcatgctg
atccgtgaggcccggagctacatcttgcgctgccacggctgtttcaagaccacgtccgac
atgagccgagtgttctgttcacactgtggaaacaagaccctgaagaaggtgtctgtgacc
gtcagcgacgacggaaccctgcacatgcacttctcccgcaaccccaaggtgctgaatccg
cggggcctccggtactcactccccgctcccaaagggggcaagtacgccatcaacccccac
ctgaccgaggaccagcgcttccctcaactgcggctctcccgcaaggccaggcagaaaacc
gacgtgtttgcccccgactacgtagctggggtgtctccttttgcagagaacgacatctcc
agccggtcggctaccctgcaggtccgagacagcaccctgggagccgggaggagacggtta
aatcccaatgcttccagaaagaagtttgtgaagaaaaggtga
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