Sus scrofa (pig): 100516312
Help
Entry
100516312 CDS
T01009
Symbol
CARS
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100516312 (CARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssc01007
]
100516312 (CARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100516312 (CARS)
Enzymes [BR:
ssc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
100516312 (CARS)
Amino acid related enzymes [BR:
ssc01007
]
Aminoacyl-tRNA synthetase
Class I (G)
100516312 (CARS)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100516312 (CARS)
Prokaryotic type
100516312 (CARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
100516312
NCBI-ProteinID:
XP_020938290
Ensembl:
ENSSSCG00000012857
UniProt:
A0A8D1CSV6
LinkDB
All DBs
Position
2:complement(2119576..2163378)
Genome browser
AA seq
831 aa
AA seq
DB search
MAGSTEDQAPDYRSILSISDEAARVRALDQHLSTRSYVQGFSLSQADVDAFRQLSGPPAD
AQLFHVARWFRHVDAILGGPQATGPPCGPPASRGRRAQPQWAPPAGSEPCQLRLYNSLTR
SKDVFVPQDGKRVTWYCCGPTVYDASHMGHARSYVSFDILRRVLRDYFRFDVFYCMNITD
VDDKIIRRARQNYLFERYREKQPSAAQLLEDVHAALQPFAAKLKETTDPDKKQMLERLER
AVTRAAEPLEEAVRASLVGEELDGRVQVLLAEAKDLLSDWLDSTHGSEVTDNSIFSQLPK
FWEAEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVQKIMDNGYGYASNGSVYFDTVKFAN
SEGHCYGKLVPEAVGDQRALQEGEGDLSISAERLSEKRSPNDFALWKASKPGEPSWPCPW
GRGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHT
GHLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHAWKDTLDYSSNTMESALQYER
FLNEFFLNVKDLLRAPGDVTGQFEKWEREETELNKCFYDKKAAVHEALCDNVDTRTALEE
MRALVSQCNLYTAARKAARRRPNRALLASVANYLTHMLKIFGAIEEESPLGFPVGAPGTS
LSLESTVMPYLQVLSEFREGVRSIARERRVPEVLQLSDALRDDILPELGVRLEDHEGLPT
VVKLVDRDTLLREREEKKRVEEEKRRKKEEAARKRQEQEAAKLAKMKVPPGEMFLSESDK
YSKFDENGLPTHDAEGKELSKGQAKKLKKLFEAQEKLHKEYLQLVQNGGFP
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttctacggaggatcaggctcccgactacaggtccatcctgagcattagtgac
gaggcggccagggtgcgggccctggaccagcacctcagcacgcgtagctatgtccagggg
ttctcactgtcccaggcagacgtggacgcgttcaggcagctctcgggccctcccgccgac
gcgcagctcttccacgtggctcggtggttcagacacgtggacgccatcctgggcggcccc
caagccaccggcccaccctgtgggcccccagcaagtagaggccggcgcgcacagccgcag
tgggctcctccggccgggtccgagccgtgccagctccgcctgtacaacagtctgacccgg
agtaaggacgtgtttgtacctcaagacgggaaaagggtgacgtggtactgctgcgggccc
accgtctacgacgcctctcacatgggacacgccaggtcctacgtctccttcgacatcttg
aggagggtgctcagggattacttcaggttcgacgtcttttactgcatgaacatcacggac
gtcgatgacaagatcatcaggcgggcccggcagaactacctgttcgagcggtaccgggag
aagcagccctcggcagcccagctcctggaggacgtgcacgccgccctgcagccgtttgca
gcaaagttaaaggagaccacggatcccgacaagaagcagatgctggagcgcctggagcgt
gcggtgacgcgggccgccgagccgctggaggaggccgtgcgggccagcctggtgggggag
gagctggacggccgagtgcaggtgttgttggcagaagcaaaggacctgctttccgactgg
ctggattccacccatggcagcgaagtgacggacaattccatcttctcgcagctgcccaag
ttctgggaggcggaattccacaaggacatggaggccctgaacgtcctccctccagacgtc
ttaacccgcgttagtgagtacgtgcccgagatcgtggactttgtccagaagatcatggac
aatggttacggctacgcttccaacgggtccgtctacttcgacacggtgaagtttgctaac
agcgagggacactgctacgggaagctggtgccggaggctgtcggggaccagagagccctg
caggagggcgagggcgacctgagcatctcggccgagcgcctgagcgagaagcggtccccc
aacgacttcgccctctggaaggcgtccaagccgggggagccatcctggccgtgcccctgg
ggaagggggcgtccgggatggcacattgagtgctcagccatggcgggcaccctcctggga
gcctcgatggacatccacggagggggcttcgacctccgcttcccccaccacgacaacgag
ctggcgcagtcggaggcctactttgaaaacgactgctgggtcaggtacttcctgcacacg
ggccacctgaccatcgcgggctgcaagatgtccaagtcgctcaaaaacttcatcaccatc
aaagatgccctgaagaagcactcggcgcggcagctgcgcctggccttcctcatgcacgcg
tggaaggacacgctggattactcgagcaacaccatggagtcggcgctgcagtacgagcgg
ttcctgaacgagtttttcttaaatgtgaaagacctcctgcgagcgcccggggatgtcacc
ggccagtttgagaagtgggagcgggaggagaccgagctgaacaagtgcttttatgacaag
aaggccgcggttcacgaagcgctctgtgataacgtggacacgcgcaccgccttggaggag
atgcgggctctggtcagccagtgcaacctctacacggcggcccggaaggccgcgagaagg
aggcccaaccgggccctgctggcgagtgtcgccaactacctcacccacatgctgaagatc
ttcggggccatagaagaggagagccccctgggcttccccgtcggagcacctgggaccagc
ctcagcctcgagtccacggtcatgccgtacctccaggtgctgtcggagttccgggaagga
gtgcgaagcatcgcccgggaacgcagagtccccgaggtcctgcagctcagtgacgccctg
cgggacgacatcctgcctgagctgggggtgcggctggaggaccacgaaggactgcccact
gtggtcaagctggtggacagagacaccttactgcgggagcgagaagagaagaaaagggtt
gaggaggagaagaggaggaagaaagaggaggccgccaggaagagacaagagcaggaagcg
gcgaaactggccaagatgaaggttccgcccggtgagatgttcttgtctgaaagtgacaag
tattccaagttcgacgaaaacggcctgcccacacacgacgcggagggcaaagagctcagc
aaagggcaggccaagaagctgaagaagctcttcgaggcgcaggagaagctgcacaaggag
tacctgcagctggttcagaacgggggcttcccgtga
DBGET
integrated database retrieval system
