Sus scrofa (pig): 100516319
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Entry
100516319 CDS
T01009
Symbol
STAU2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100516319 (STAU2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100516319 (STAU2)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100516319 (STAU2)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100516319 (STAU2)
mRNA cycle factors
Stress granule specific factors
100516319 (STAU2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
100516319
NCBI-ProteinID:
XP_020944850
Ensembl:
ENSSSCG00000006179
UniProt:
A0A8D1MNQ8
A0A287A6A7
LinkDB
All DBs
Position
4:62139456..62455509
Genome browser
AA seq
632 aa
AA seq
DB search
METDSSMERLALAAFLFTASLQDKMATPKEKTPMCLVNELARFNRVQPQYKLLKERGPAH
SKMFSVQLSLGEQTWESEGSSIKKAQQAVANKALAESTLPKPVQKPPKSNVNNNPGSITP
TVELNGLAMKRGEPAIYRPLDPKPFPNYRANYNFRGMYNQRYHCPIPKIFYVQLTVGNNE
FFGEGKTRQAARHNAAMKALQALQNEPIPEKSAQNGESGKEMDDDKDANKSEISLVFEIA
LKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLP
PLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNPISRLAQIQQAKKEKEPDYVLLSERGMPR
RREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTNLQDQLDKTGENKGWSG
PKAGFPEPTNNTPKGILHLSPDVYQEMEASRHKVISGTTLGYLSPKDMNQPSSSFFSVSP
TSNSSATIARELLMNGTSPTAEAIGLKGSSPTPPCSPVQPSKQLEYLARIQGFQVHYCDR
QSDKEYVTCLTLAPVQMTFHAIGSSIEASHDQAALSALKQFSEQGLDPMEGAMNIEKGSL
EKQAQHLGEKADNNQTHPGSIAQDCKKSRSVI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggattcttctatggagagacttgccttggcagcctttttatttacagcttct
ctccaagataaaatggcaacccccaaagagaaaactccaatgtgtctggtaaatgagtta
gcccgtttcaatagagtccaaccccagtataaacttctgaaagaaagagggcctgctcat
tcgaagatgttctcagtgcaactgagtcttggggagcagacatgggaatccgaagggagc
agtataaagaaggcccagcaagctgtcgctaataaggctttagctgaatctacgcttccc
aaaccagttcagaagccacccaaaagtaatgttaataataacccaggtagtataactcca
actgtggaactgaatgggcttgctatgaaaaggggagagcctgccatctacaggccatta
gatccaaagcctttcccaaattatagagctaattacaactttcggggcatgtacaatcag
aggtatcattgcccaatacccaagatcttctatgttcagctgacagtaggaaataatgaa
ttttttggggaaggaaagactcgacaagccgctagacacaatgccgcaatgaaagccctt
caagcactgcagaatgaacctattccagaaaaatcagctcagaatggcgaatcaggaaaa
gaaatggatgatgacaaagatgcaaacaaatctgagatcagcctagtgtttgaaattgct
ctgaagcgaaatatgcccgtcagttttgaggttatcaaagaaagtggaccaccacacatg
aaaagctttgtcactcgggtgtccgtgggtgaattctccgcagaaggagagggaaacagc
aaaaaactctccaagaagcgcgctgcaaccactgtcctacaggagcttaagaaacttcca
cctcttcctgtggttgaaaagccaaaactattttttaaaaaacgccctaaaacaatagta
aaggctggaccagaatatggtcaaggaatgaaccccattagccgcctggctcaaattcaa
caggccaaaaaggaaaaagagccagattatgttttgctttcggaaagaggaatgcctcga
cgtcgggaatttgtgatgcaggtcaaggtaggcaatgaagttgctactggaacaggacct
aataaaaagatagccaaaaagaatgctgcggaagcaatgctgttacaacttggttataaa
gcatccactaatcttcaggatcagcttgacaagacaggggaaaacaaaggatggagtggt
ccgaaggctgggtttcctgaaccaacaaataacactccaaaaggaattcttcatttgtct
cctgatgtttatcaagagatggaagccagccgccacaaagtaatctctggcactactcta
ggctatttgtcacccaaagatatgaaccagccctcaagctctttcttcagtgtatctccc
acatcgaatagttcagctaccattgccagggaactccttatgaatggaacgtctcctaca
gctgaagccataggtttaaaaggaagttctcctactcccccttgttctccagtacagcct
tcaaaacaactggaatatttagcaaggattcaaggctttcaggttcactactgtgataga
caaagtgacaaagagtatgtgacctgtctgacattagcccctgtgcagatgactttccat
gctattggaagctccattgaagccagccatgaccaggcagctttaagtgccttgaaacaa
ttttctgaacaaggattggatccgatggaaggggcaatgaatattgaaaaaggttctctt
gaaaaacaagcccagcatctgggggagaaagcggacaataaccagacacacccgggctcc
atcgctcaggactgcaagaaatcaaggtcggtcatctag
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