Sus scrofa (pig): 100516342
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Entry
100516342 CDS
T01009
Symbol
TTC21B
Name
(RefSeq) tetratricopeptide repeat protein 21B isoform X1
KO
K19673
tetratricopeptide repeat protein 21B
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100516342 (TTC21B)
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
100516342 (TTC21B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_TT21_C
ARM_TT21_2nd
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_8
TPR_1
TPR_12
ANAPC3
TPR_7
TPR_CcmH_CycH
TPR_11
TPR_6
TPR_21
TPR_17
TPR_9
TPR_Slam
PknG_TPR
SPOB_a
DUF6584
TPR_4
YfdX
Motif
Other DBs
NCBI-GeneID:
100516342
NCBI-ProteinID:
XP_020930449
Ensembl:
ENSSSCG00000015908
ENSSSCG00000015909
UniProt:
A0A4X1VN22
F1RPM9
LinkDB
All DBs
Position
15:complement(72430250..72512503)
Genome browser
AA seq
1315 aa
AA seq
DB search
MDSQGLQTLINYYCQERYFHQVLLVASEGIKRYGNDPVFRFYHAYGTLMEGKTQEALREF
EAIKNKQDVSLCSLIALINAHKRSPNPDREAILESDARLKEQRKGAGLKALYHAGLFLWH
IGHHDKAREYIDRMIKMSNGSKEGQILRGWLDITRGKDSYTKKALRYFEEGLQDGNNIFA
LLGKAQCLEMRQNYSGALETVNQIIMNFPSFLPAFIKKMKLQLALKDWDQVVETAQRILL
QDNQNVEALRMLALYHLCRDGDIEKAATKLENLGNALDAMEPQNAQLFYKITVAFSRTCG
RSQLILQKTQTLVERAFNLTPQESEFATELGYHLVLQGKVKEALKWYNASLTLGENNVSA
LIGCIQCQLIEGQLQEAEHQLEFLREIQQSIGKPAELTYLHAILAMKKNKRQEEVINLLN
DALDTHFSHLEDLPLGIQYFEKLNPDFLLEIITDYLNFCPMQPASPGKPLSPFLRRCTSV
LETIVRTVPGLLQAVFLIAKVKYLSGDIEAAYNNLQHCLERSPSYADAHLLMAQVYLSQE
KFKLCSQALELCLSYDFKVREYPLYHLIKAQSQKKMGEITEAIKTLRMAMNLPGMRTGAS
SKSKCTKTEVDASHRLSIFLELVEVHRLNGEQHEAAKVLQDAIHEFSGTSEELRVTIANA
DLALAQGDVERALSMLRNVTVEQPYFIEAKEKMADIYLKHRKEKMLYITCYREIAERMPS
PRSFLLLGDAYMNIQEPEEAIVAYEQALNQNPKDGTLASKIGKALVKTHNYSKAITYYEA
ALKSGQQNYLCYDLAELLLKLKLYDKAEKVLQHALAHEPVNELSALMEDGRSQVLLAKVY
SKVNRPGDAVTSLQQARELQARVLKRVQMEQPDAVPAQKHLAAEICAEIAKHSVAQRDYE
KAIKFYREALVHCETDNKIMLELARLYLAQDDPEACLRHCALLLQSDRDNEAATMMVADI
MFRKQDYEQAVFHLQQLLERKPDNYKTLSRLIDLLRRCGKLEDVPRFFSMAEKRNSRAKL
EPGYQYCKGLYLWYTGEPNDALRHFNKARKDCDWGQNALYNMIEICLNPDNETVGGEVFE
NLDRDLGNSSEKQESVQLAVRTAEKLLKELKPQTVDGHVQLRIMENYCLMATKQKSNVEQ
ALNTFTEIATSEKDHIPALLGMATAYMILKQTPRARNQLKRIAKMNWNPIDAEDFERSWL
LLADIYIQSAKYDMAEELLKRCLRHNRSCCKAYEYMGYIMEKEQAYADAALNYEMAWKHG
NQANPAVGYKLAFNYLKAKRYVDAIDVCHQVLKAHPAYPKIRKDILDKARACLRP
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcaggggctgcagactttgattaattactattgtcaagaaagatatttccac
caagtgttacttgttgccagtgaaggaattaagagatatggcaatgacccagtcttcagg
ttttaccatgcctatggtacattaatggaaggtaaaactcaagaagcacttcgagaattt
gaggctattaaaaataaacaagatgtatcactctgttctctaattgcactgataaatgct
cataaaaggagtcccaatccagatagagaagctattctggaatcagatgccaggttgaag
gagcaacgtaaaggagctggactgaaagccttgtatcatgcaggcttatttttgtggcac
attggtcatcatgataaggcgagagagtatattgaccgaatgatcaaaatgtcaaatggt
agtaaagagggacagattttgagaggatggcttgatattacaagaggaaaagactcttat
actaaaaaagcactaagatattttgaagagggattacaagatggaaataatatttttgct
cttctgggtaaggcacaatgccttgaaatgcgccagaattattcaggtgctctggagact
gtgaaccagataatcatgaactttccaagtttccttcctgcctttataaagaaaatgaaa
ctacaactagccttgaaagattgggaccaggtggttgagacagcacagaggatattgctt
caagataatcagaatgtggaagcactaagaatgctggccctttaccatttgtgtagggat
ggggatatagagaaggctgccaccaagctggaaaacttaggaaatgcactggatgccatg
gaaccacagaatgctcagcttttttataagatcacagtagccttcagcagaacttgtgga
cgtagtcaactcattcttcagaaaactcaaacattagtagaaagagcttttaatttaact
cctcaggaatcagaatttgctacagaacttggataccacctggttttacaaggaaaagtt
aaagaggcattgaagtggtataatgcttccttaacactaggagaaaacaatgtctctgca
ctaatcggatgcattcagtgtcagttgatagaaggacagttacaggaggcagagcatcag
ctagaattccttagggaaattcagcagtctattggaaaaccagcggaattaacctattta
catgcaattcttgctatgaagaaaaataaacgacaagaagaagttattaatctgttaaat
gatgccctggatactcatttttcacatttagaagatttaccccttggcatacagtatttt
gagaagttaaatcccgatttcttgctagaaattattacagactatttgaatttctgtcca
atgcagcctgcaagtcctgggaagcctctttctccatttctcagacgttgtacctcagtc
ctagagactatagtaaggactgtaccaggtcttctgcaagctgtcttcctaatagcaaaa
gtgaaatatctgtcaggtgatattgaagcggcttataataacctgcagcattgcctagag
cgcagtccttcttatgcagatgctcacctcctgatggctcaggtttatttgtctcaggaa
aaattcaaattgtgttctcaggctcttgaactttgtctgagctatgattttaaggtgaga
gaatatcctttatatcacttgataaaagctcagtcacaaaagaaaatgggagaaataaca
gaagcaattaaaactctgcgtatggcaatgaatttaccagggatgagaactggtgcttcc
tcaaaatcaaaatgcacaaaaactgaagttgatgcaagccatcgtttatcaatctttctt
gagttggtagaggttcaccgcttaaatggagaacagcatgaggcggccaaagttttacag
gatgccatccatgaattttctgggacatctgaagagctgcgtgttactattgctaacgca
gacctagctttagctcaaggagatgtggagcgggctttaagcatgcttcggaatgtcact
gtggaacagccttatttcatagaggctaaagaaaaaatggcagatatctatctgaagcac
agaaaagagaaaatgttatatatcacttgttatagagaaattgctgaaaggatgcccagc
cctcgttcttttcttctccttggtgatgcatacatgaatattcaagagcccgaagaagcc
atagtagcttatgagcaagcattaaaccagaacccaaaggatgggaccttggcaagcaaa
attgggaaagcgcttgtcaaaactcacaactattcaaaggcaatcacttattatgaagct
gctctgaagagtggacagcagaattatctttgctatgacctggctgagctcttactaaaa
ttgaaattgtatgacaaagcagaaaaagttcttcagcatgctctagcgcatgaacctgta
aatgaactttcagctctcatggaggatggacgttctcaagttcttctagcaaaagtttat
agtaaagtgaacagacctggtgatgcagtcacttcgttacaacaggctcgagaattacaa
gctcgggtactaaaacgtgttcagatggaacagccagacgcagttcctgcacagaaacat
ttagcagctgaaatttgtgcagagattgcaaaacattctgttgctcagcgagactatgaa
aaagcaattaagttttatagagaggctcttgttcattgtgaaacagataataagataatg
ctggagctggcaagattatacctagcacaggacgaccctgaagcctgtctgcggcactgt
gccctgctcctccagagtgaccgggacaatgaagccgccaccatgatggtggcagatatc
atgttcagaaaacaggactatgaacaagccgtgtttcatttacagcagcttttagaacga
aaaccagataattataagacattatctcgtttaattgacctcctgagaagatgtggaaaa
cttgaggatgttccaagatttttctcaatggctgagaaacgtaactccagagcaaaactg
gagccagggtatcagtattgtaaaggactatatctctggtatactggagaaccaaatgat
gcccttcgacattttaataaagctcggaaagactgtgactggggtcaaaacgccctttat
aatatgatagaaatctgtttaaatccagataatgaaactgttggaggtgaagtatttgaa
aatctggatagagacctgggtaattcatctgagaagcaagaatctgtgcagttagcagtg
agaacagcagaaaagctcctcaaagaactaaaacctcagactgttgatggtcacgtacag
cttcgcataatggaaaactattgcttaatggccaccaaacagaaatctaacgttgagcag
gcgttaaataccttcaccgaaatagcaacatccgagaaggatcatattccagcacttttg
ggaatggcaacagcttatatgatcttgaaacaaaccccaagagcccgcaatcagctgaag
cggattgcaaaaatgaactggaatcctattgatgctgaggactttgagaggagttggctg
ctgcttgctgatatttatattcaatcagcaaagtacgacatggcagaagaactgttaaaa
cggtgcctgcgtcacaataggtcttgctgcaaagcttatgaatatatgggatacattatg
gaaaaagaacaagcatatgcagatgctgccttaaactacgagatggcatggaaacatggc
aatcaggcaaatccagcagtaggatacaaactggcatttaattacttaaaagcaaaaaga
tatgtggatgcgatcgacgtatgtcaccaggttctcaaagcacatccagcttaccccaaa
atcagaaaggatatacttgataaggcccgtgcatgtttaagaccttga
DBGET
integrated database retrieval system
