Sus scrofa (pig): 100516706
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Entry
100516706 CDS
T01009
Symbol
GABRA1
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04082
Neuroactive ligand signaling
ssc04723
Retrograde endocannabinoid signaling
ssc04727
GABAergic synapse
ssc04742
Taste transduction
ssc05032
Morphine addiction
ssc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100516706 (GABRA1)
04082 Neuroactive ligand signaling
100516706 (GABRA1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100516706 (GABRA1)
04723 Retrograde endocannabinoid signaling
100516706 (GABRA1)
09157 Sensory system
04742 Taste transduction
100516706 (GABRA1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
100516706 (GABRA1)
05033 Nicotine addiction
100516706 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100516706 (GABRA1)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
GABA-A
100516706 (GABRA1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
100516706
NCBI-ProteinID:
XP_003134137
Ensembl:
ENSSSCG00000017026
UniProt:
A0A8D0RLN6
A0A480NP21
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All DBs
Position
16:complement(61656583..61723428)
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AA seq
456 aa
AA seq
DB search
MKKSLGLSDYLWAWTLLLSSLNGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPXPKKTFNSVSKID
RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagtctgggtctctctgactacctttgggcctggaccctcctcctgagctca
ctgaatggaagaagctatggacaaccctcattacaggatgaacttaaagacaacaccact
gtcttcaccaggattttggaccgactcctggatggttatgacaatcgcctaagaccagga
ttaggagagcgtgtaaccgaagtgaagaccgatatcttcgtcaccagcttcggacccgtt
tcagaccatgatatggaatatacaatagatgtatttttccgtcaaagctggaaggatgaa
aggttaaaatttaaaggacccatgacagtactccggttaaataacctaatggcaagtaaa
atctggactccggatacctttttccacaatgggaagaagtcagtggcacacaacatgacc
atgcccaacaagctcctgcggatcaccgaggatgggaccttgttgtacaccatgaggctg
acagtgagagctgaatgtccgatgcatctggaagatttccctatggatgcccatgcctgc
ccactaaaatttggaagctatgcttatacaagagcagaagttgtttatgagtggaccaga
gagccagcacgctcagtggttgtagcagaagatgggtcacgcctaaatcagtatgatctt
cttggacaaacagtcgactctggaattgttcagtctagtacaggagaatacgttgttatg
accactcatttccacttgaagagaaagattggctattttgttattcaaacatacctgcct
tgcataatgacggttattctctctcaagtctcattctggctgaacagagagtctgtacca
gcaaggactgtctttggagtaacaacggtgctcaccatgacaacgttgagtatcagtgcc
agaaattccctccctaaggtggcttatgcaactgcaatggattggtttatcgcagtgtgc
tatgcctttgtattctcagctctgatcgagtttgccacagtaaactatttcaccaagaga
ggttatgcatgggatggcaaaagtgtggttccagaaaagccaaagaaagtgaaggatcct
ctcattaagaaaaacaacacttatgctcctacagcaaccagctacacacctaatttggcc
aggggcgaccccggcttagccaccattgctaaaagtgcaaccatagaacccaaagaagtc
aagccggaaacaaaaccaccgnaaccgaagaaaacctttaacagtgtcagcaaaattgac
cggctgtcaagaatagccttcccattgctgtttggaatctttaacttggtctactgggct
acatatttaaacagggagcctcagctaaaggcccccaccccgcatcaatag
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