Sus scrofa (pig): 100516785
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Entry
100516785 CDS
T01009
Symbol
DCP2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100516785 (DCP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100516785 (DCP2)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
100516785 (DCP2)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100516785 (DCP2)
mRNA degradation factors
5'-3' decay
Decapping complex
100516785 (DCP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
100516785
NCBI-ProteinID:
XP_003123880
Ensembl:
ENSSSCG00000014204
UniProt:
A0A8D0Q7A5
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All DBs
Position
2:complement(116736800..116804693)
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AA seq
423 aa
AA seq
DB search
METKRVEIPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC
GIRDFAKAVFNHCPFLLPQGEDVEKILDEWKEYKMGVPTYGAIILDETLENVLLVQGYLA
KSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGI
PKDTKFNPKTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWLS
RRFGDSSDSDNGFSSAGSTPAKPTVEKLSRTKYRHSQQLFPEGSPGDQWVKHRQPLQQKP
YNNNHSEMSDLLKVKNQSMRGNGRKQYQDSPNQKRRTNGAHSQPAKQQNPLMKCEKKLHP
RKLQDTFEADAAYDLPCSGEDQLLEHAEGQSVACNGHCKFPFSSRAFLSFKFDHNAIMKI
LDL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaacgggtggagattcccggcagcgtcctggacgatctctgcagccgattt
attttgcatattcccagcgaggaaagagacaatgctatccgagtgtgttttcagattgaa
cttgcccattggttttacttggatttctacatgcagaacacaccaggattacctcagtgt
gggataagagactttgctaaagctgtcttcaatcattgtccatttttgctgcctcaaggt
gaagatgtggaaaaaattttggatgaatggaaggagtataaaatgggagtgccaacatat
ggtgcaattattcttgatgagacacttgaaaatgtactactggttcaggggtacctagca
aaatcaggctggggatttccaaaaggaaaagtgaataaagaagaagctcctcatgattgt
gctgctagagaggtctttgaagaaactggttttgatattaaagattatatctgtaaggat
gattacattgaacttcgaatcaatgaccagcttgctcgtttgtacatcattccaggaatt
ccaaaagatacaaaatttaacccaaaaaccagaagagaaattcggaacattgagtggttc
tccattgagaaattgccctgtcatagaaatgatatgacccccaaatccaaactcggtttg
gcacctaacaaattttttatggccattccttttatcagaccattaagggactggctttct
agaagatttggagattcctcagatagtgacaatggattttcctcagctggtagcacacca
gctaaacccactgtggaaaaactgagtcgaaccaaataccgccacagtcagcagttattt
ccagaaggttctcctggtgaccagtgggtaaagcacaggcaaccgctgcagcaaaaacca
tataataataatcattctgaaatgtctgaccttttaaaagtaaagaatcagagtatgagg
ggaaatggcagaaaacagtatcaagattcacctaatcaaaagagaagaacaaatggggcc
cacagccagccagccaagcagcagaatcccttgatgaaatgtgaaaaaaaacttcatcca
cgaaaacttcaggatacttttgaagcagatgctgcatatgacttaccttgctctggtgaa
gaccaattgctagaacatgctgagggccagtctgtggcatgtaatggacattgcaagttc
ccattttcatctagagcctttctgagtttcaagtttgaccataatgctataatgaaaatc
ttggacctttga
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