Sus scrofa (pig): 100516885
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Entry
100516885 CDS
T01009
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04082
Neuroactive ligand signaling
ssc04723
Retrograde endocannabinoid signaling
ssc04727
GABAergic synapse
ssc04742
Taste transduction
ssc05032
Morphine addiction
ssc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100516885 (GABRA6)
04082 Neuroactive ligand signaling
100516885 (GABRA6)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100516885 (GABRA6)
04723 Retrograde endocannabinoid signaling
100516885 (GABRA6)
09157 Sensory system
04742 Taste transduction
100516885 (GABRA6)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
100516885 (GABRA6)
05033 Nicotine addiction
100516885 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100516885 (GABRA6)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
GABA-A
100516885 (GABRA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
100516885
NCBI-ProteinID:
XP_003134138
UniProt:
A0A8D1XUC0
A0A4X1TXJ7
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All DBs
Position
16:complement(61855698..61872503)
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AA seq
453 aa
AA seq
DB search
MASPLSWLYMILWVENALGKLEDEGNFYSENVSRILDNLLEGYDNRLRPGFGGAVTEVQT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPAEILSLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYAIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQKAKKKAQIAASSPVTITKATEPLEAEI
VLHPDSKYHLKKRITSLTLPIVPSFEASKVLARAPILQSTPATPPPLSPVFGDTSKIDQY
SRILFPVAFAGFNLVYWIVYLSKDTMEVSSSVD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcctctgtcctggttgtacatgattctgtgggtagaaaatgccctaggaaaa
cttgaagatgaaggaaatttctactcagaaaatgtcagtcggatcctggacaacttgcta
gaaggttatgacaatcggctacggccaggatttggaggtgctgtcactgaagtccaaaca
gacatctacgtgacgagttttgggcctgtgtcagatgtggagatggagtatacgatggac
gttttcttccgccaaacttggactgatgagaggttgaagtttggggggccagctgagatt
ctgagtttgaataacttgatggtcagtaaaatctggacacctgacactttttttaggaat
ggcaagaaatcaattgctcacaatatgacaactcctaataaactcttcagaataatgcag
aatggaaccattctctacaccatgaggctcactatcaatgctgactgtcctatgaggctg
gttaatttccctatggatgggcatgcttgtccactcaagtttgggagttatgcttacccc
aaaagtgaaatcatatatacatggaaaaaaggaccactttactcagtggaagtcccagaa
gaatcttcaagcctacttcagtatgatctgattggacaaacagtatctagtgaaacaatc
aaatctaacacaggtgaatatgcaataatgacggtttatttccacttgcaaaggaagatg
ggctacttcatgatacagatatatactccttgcatcatgacagtcattctttcccaggtg
tctttctggattaataaggaatctgtgccggccagaactgtctttgggatcaccactgtt
ttaaccatgaccactttaagcatcagtgcccggcactccttgccaaaagtgtcttatgcg
accgccatggattggtttatagctgtttgctttgctttcgtcttttctgctcttattgag
tttgcggctgtcaactacttcaccaatcttcagactcagaaggccaaaaagaaggcacag
attgcagcctcatcccctgtgactatcacaaaagcgactgaacccttggaagctgagatt
gttttgcatcctgattccaagtatcatctgaagaaaagaatcacctctctgaccttgcca
attgttccatcttttgaggccagcaaagtcctcgcgagagctcccatcttacagtcaaca
cctgctacacccccacccctctctccagtctttggagataccagtaaaatagaccaatat
tctcggattctcttcccagttgcatttgcaggattcaaccttgtatattggatagtttat
ctttccaaagacacaatggaagtgagtagcagtgttgactag
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