Sus scrofa (pig): 100516949
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Entry
100516949 CDS
T01009
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100516949 (TMC1)
03037 Cilium and associated proteins [BR:
ssc03037
]
100516949 (TMC1)
Transporters [BR:
ssc02000
]
Other transporters
Pores ion channels [TC:
1
]
100516949 (TMC1)
Cilium and associated proteins [BR:
ssc03037
]
Other cilia and associated proteins
Stereociliary proteins
100516949 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Ac76
Toddler
Motif
Other DBs
NCBI-GeneID:
100516949
NCBI-ProteinID:
XP_020920511
Ensembl:
ENSSSCG00000005266
UniProt:
A0A4X1VXY1
LinkDB
All DBs
Position
1:225714601..226111045
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AA seq
759 aa
AA seq
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MPPKKVQIQVEEKEDDTEESSSGEEEENKLPRRESLRPKRKRTRDVINEDDPEPEPEDEE
TRKAREKERRRRLRRGAEEEEEIDEEELERLKAELDEKRQMIATVKCKPWKMEKKIEVLK
EAKKFVSENEGALGKGKGKQWFAFKMMMAKKWAKFLRDFENFKAACIPWENKIKAIESQF
GSSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFG
VLYDFNGLAQYSVLFYGYYDNKRTIGWMNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIG
DDGGGDDNTFNFSWKVFTSWDYLIGNPETADNKFNSITMNFKEAIIEERAAQVEENVHLI
RFLRFLANFFVFLTLGGSGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCP
TLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANITL
WEANMIKAYNASLTGNSTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILI
GDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGIN
ILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPS
FDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVVLVMALTIYYLNATAK
GQKAANLDLKKKMKQQALENKLRNKKMAAARAAAAAGSQ
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaagaaagtgcaaatccaagtagaagaaaaagaagatgacactgaggaaagt
tcaagtggagaagaggaggaaaacaaactacctcgaagagagagtttgagaccaaagagg
aaacgaaccagagatgttataaatgaggatgacccagaacctgaaccagaggatgaagaa
acaaggaaggccagagaaaaagagagaagaaggaggttaaggagaggagcggaagaagaa
gaagaaatcgatgaagaggaattggaaagattgaaggcagagttagatgaaaaaagacaa
atgattgctactgtcaaatgcaagccttggaaaatggagaagaaaattgaagttctcaag
gaagcaaaaaaatttgtgagtgaaaatgaaggggctcttgggaaaggaaaaggaaaacaa
tggtttgcatttaagatgatgatggccaagaaatgggcaaaatttctccgtgattttgag
aactttaaagctgcttgtatcccatgggaaaataaaatcaaggcaattgaaagtcagttt
ggctcatcagtggcttcatacttcctctttttgaggtggatgtatggagtaaatatggtt
ctctttatcctgacattcagccttatcatgttaccagagtacctctggggtttgccatat
ggcagtttacctaggaaaacagttcccagagctgaagaggcatcagcagccaactttggt
gtgttgtatgacttcaatggcttggctcaatattctgtcctcttttatggctactatgac
aataaacgaacaattggatggatgaatttcagactgccactctcctattttctagtgggg
atcatgtgcattggatacagctttctggttgtccttaaagcgatgaccaaaaatattggt
gatgatggaggtggtgatgacaacacttttaacttcagttggaaggtgttcaccagctgg
gactacttaattggcaatcctgaaacagcggacaacaaattcaattctattacaatgaac
tttaaggaagctataatagaagaaagagcagcccaagtagaagaaaacgttcacttgatc
agattcctgaggtttcttgctaacttcttcgtctttctaacacttggcgggagtggatac
ctcatcttttgggctgtgaagcgatcccaggagtttgcacagcaagatcctgacaccctt
gggtggtgggaaaaaaacgaaatgaacatggtcatgtccctcctggggatgttctgtcca
acactgtttgatttatttgctgaattggaagactatcatcccctcatcgctctgaaatgg
ctactgggacgcatttttgctcttcttttaggcaacttgtatgtatttattcttgcattg
atggatgagattaacaacaagattgaagaagagaagctagtaaaggccaatattacctta
tgggaagccaacatgatcaaggcctacaatgcatcgctcactggaaatagcactgggcca
cccttttttgtacatccggcagatgtacctcgaggaccctgctgggaaacgatggtgggg
caggaatttgtgcggttgactgtttctgatgttctgaccacatacgtcacaattctcatt
ggggactttctccgagcatgttttgtgaggttctgcaattactgctggtgctgggatttg
gaatatggatatccttcatacaccgaatttgacatcagtggcaatgtccttgcactgatc
ttcaatcaaggcatgatctggatgggctccttcttcgcccccagcctgccaggaatcaat
atccttcggctccacacatccatgtacttccagtgctgggctgtgatgtgttgcaatgtt
cctgaggccagggtcttcaaggcttccagatccaataacttctacctgggaatgctcttg
ctcatcctcttcctgtccaccatgcccgtgctgtacatgatcgtatccctcccgccatct
tttgattgtggccccttcagtggcaaaaataggatgtttgaagtcattggagaaacactg
gagcatgatttcccaagctggatggcaaagatcttgagacagctttctaatcctggacta
gttattgctgttgttttggtcatggctttgaccatatattatctcaatgctactgcaaag
ggccagaaggcagcaaatttggatctaaaaaagaagatgaaacagcaagctttggagaac
aaattgcgaaacaagaaaatggcagctgcacgagcagctgcagctgctggcagccagtaa
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