Sus scrofa (pig): 100517025
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Entry
100517025 CDS
T01009
Name
(RefSeq) uncharacterized protein LOC100517025 isoform X3
KO
K23400
doublecortin domain-containing protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100517025
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100517025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX2_DCDC1
DCX
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
100517025
NCBI-ProteinID:
XP_013849925
LinkDB
All DBs
Position
2:29365181..29796389
Genome browser
AA seq
1824 aa
AA seq
DB search
MAEEHRAALSQVPLSPLTKAKEVSQLSSPEGAFSGDTVHPIYKYISNDLPREFMSFQAKA
VIKTTEDYLQFGPSRLLHSAAVSEGSGLQDCSRHQTASDHSYNEISDPDSCKSNSKNNSC
FISASKRNRPVSAPVGQLRVAELSSLKSKLDQNWHKLSQRHKLQPRVIRVTAYKNGSRTV
FAKVTVPTITLLLKECTEKLNLNMAARRVFLADGTEALKPEDIPHEADVYVSTGEPFLDP
FKKIKDHLLLMKKVTWTMNGLMFPTDIKRRKTKPVLSSRMKKLTEKTSARILFFKNGMGQ
DGHEITVGKETMKKVLDICTMRMNLNSPARYLYDLYGRKIKDISKVPLLEKCLQNSITPL
RGPVWVSKGEGFSPSGAKMYIQGVLLALYQRLKSAKKFYKQLNLAADEQKGKITEKVILS
MTAKEHHQAQEEVNRLIDELQTAIKSHRGHLSKLGPQLQAEQEQFSSYVYQHIKSLPANT
LIPGGLQLKIFESGKDTGEISVYISKKDLGPNNPSQTGHMMERLLLKIHQRLQGSSINPP
SLNFSSARLFDEHGQEIKNPLLLKNEQKIWVSYGKAYRSPLHPVLGLTFDRVTAFARGGI
IVAYKTFLDPNAVLLPGCDNWEICEGFPVNLNGTSQQMPDQFETVNSENHFLQNKADPNM
VLHASVSIRKQSFSSSEESSGSQKAPLTLWPAASVWLITKTGMILSRAITQGCLAIGHPI
RLKAAEGTSLEGYKLILQKRNKGDDSQKWIFGIDSCIYSKAYPQFVLTYLEELNAQVDVT
QTEYHLHHGAWTAAHWEHGSSVAEEVLQSSASIPGLKQLPEPSDAHLMPEGSLGETGQLT
VALVRKLEEKHPKASAQRWSIKHEGTGKPGQWKHSRVENPLWNKLTYMWPVLPSGQLNEE
FDWPIEGLLLPNSPPMKKPICKTPKQYVPVRLRVLQNGDKNKTRALTIISPGKSPEQKMQ
NVDTERKGNVKNAYVTKYSETETNQAGFHQLLERCTEILNLPSAARRLFNEKGKEIFNLK
DLQRDELVYVSCGEHWINPDLSIAQQKKQIFLRNLASDISKIHTFCSTHKIEALVLEVQS
DIVAGAKLAVHKPVPGEEKQIIEPEEKQMQKNALTTENASSEILDSHARAHLRVKACHTL
LRYAWQETSHNFDEDDSLPKKTEEELFENMELENKYSHSPKQSKLQKLRRQQFEYRDGQI
ISCAAPQLVLGVQSPNPHSGTEVVLVDKKADDSHQRWLHEEDSRTFHLVSNPDLVLAVSM
TKARDDACGYPVIAQKYKPYDNGTSNQKWNYLKNKKAFMAFHSTAMDKEITAANYAGICT
SSVIKEENIDQPGYYYVSPNGKRKIMLCLACGQSMRAEKGLKQLLPGQPFLCASGSKTQK
PFSRGPFKVISVAKADLSSDEAENTLSYYEECLLSLRMKTCSQVVSHSSMAVIHQKAVKI
IAYKNGDGYRNGKLIVAGTFPMLLTECTQQLGLARAASKVYTKDGTTILSLRDLVLWALD
ESFIQRDSEEKKKETAPDGTKETRVKNIEVNSRMKMKNKSFPKSVTSDSLDGIDKSLLTL
ILRNPIAIWVSCGEPFLSPNALQRAEKIGKQNWQKKDKILADLDTMKHKMRQLKGRRVAA
CQPTTMVPNKSPLQPVVVEGGWTEQTQEEIKLMDLIRHTEQAYFSGVQELQSKRNSPIAP
KCRTLKKSSLYKQPNAKRVWVYLNGGRPEDGTFARGKTISELLDDCSSRLKLAHPARTLY
TPEGEPIHSWDDIERDMVICVTTGHGFITPKELKQLVEVRANYARICRQQGPQATDIVLS
PSAKLQSLASLKNTRELPSKELLI
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagcacagagcagcactttctcaagttcctttatcacccttaactaaagcc
aaggaggtatcacagctaagcagtcctgaaggcgccttcagtggggatacagttcaccca
atatacaaatatatttcaaatgatttgccaagggagtttatgtcatttcaggcaaaagca
gttattaaaactactgaagattatttgcagtttggccccagcagacttttgcattcagca
gcagtatcagaagggtcaggacttcaagattgttccagacatcaaacagcatcagatcat
agctacaatgaaatatcagacccagatagctgcaaatcaaacagtaaaaacaattcttgt
tttatatcagcatccaagagaaacagacctgtcagtgctccagtgggtcaactgagagtt
gcagagctctcttctttaaaatctaagttggaccagaattggcataaattgtctcaaaga
cacaaactccaacccagagtgattagagtaacagcttataaaaatggatctagaacagtc
tttgccaaagttactgtaccaaccatcaccttgttgctgaaggagtgcacagaaaagcta
aatttgaacatggccgcacgacgagtgttcttggcagacggcactgaagccctcaaacct
gaagatataccccatgaagccgacgtttatgtttcaacgggagagccctttttagatcca
ttcaaaaaaattaaagaccatctgttgttgatgaagaaagttacttggacaatgaatggg
ctgatgtttcctactgatatcaaaagacggaaaaccaagcctgttctttctagtagaatg
aagaaacttactgagaagacttcagcccgaattcttttctttaagaatggcatggggcag
gatgggcatgagataacagtgggaaaggaaacaatgaaaaaggttttagatatttgcaca
atgagaatgaacctaaattcaccagccagatatctttatgatttgtatggcagaaaaatt
aaagatatttcaaaagttcctctgcttgaaaaatgcctgcaaaattccatcacacctttg
cggggaccagtttgggtctctaagggagaaggtttcagcccctcaggagctaagatgtac
atccaaggagttcttttggccttgtaccaacgattaaagtctgcaaaaaaattttataaa
cagttgaatctggctgcagatgaacagaaagggaaaattactgaaaaagtcattctttca
atgacagcgaaggaacaccatcaggcacaagaagaagtgaacaggctgattgatgaattg
cagacagctatcaaaagccacagaggtcatctctctaaacttggcccccaattacaggct
gagcaggagcaattctcctcttatgtctaccaacacattaaaagcctaccagcaaacact
cttatcccagggggcctgcagctcaagatatttgaaagtggtaaagatactggagagatc
tctgtttatatcagcaaaaaagatctggggccaaataacccatctcaaaccggccatatg
atggaaagactacttctcaagattcatcaaaggcttcaaggttcttccatcaacccacca
agcctcaatttttcttcagcccggctttttgatgaacatggtcaagaaattaagaatcca
ctcttgctgaagaatgaacaaaaaatttgggtctcttatggtaaagcatacagatctcca
ctacaccctgttttgggtttgacctttgaccgagtgactgcatttgccagaggtggcatt
atagttgcatataaaaccttcctggatcctaatgctgttcttctacctggatgtgacaat
tgggaaatttgtgaaggatttccagttaatctcaatggcaccagtcaacagatgcctgat
caatttgaaacggtgaactcagagaaccatttcctacagaacaaggcggaccccaatatg
gtccttcatgcctctgtttccatcagaaaacagagtttctcaagtagtgaagagagcagt
gggagtcagaaagcaccattgacgctgtggcctgcagccagtgtgtggctgatcacaaag
actggaatgatcctgagccgagcgataactcagggctgtctggctattggtcatccaatc
agactcaaggccgctgagggaacatcactagaaggatacaaattaatcctacagaaaaga
aataaaggagatgattctcagaagtggatatttggaattgacagctgcatttattctaag
gcttatcctcagtttgttctgacctacctagaggagctaaatgcacaagtggatgtgacc
cagacagagtatcaccttcaccatggtgcctggaccgcagctcattgggaacatggcagc
agcgtagcagaagaggttctacaaagcagcgccagtatccctggtctgaagcagctgcca
gagccttcagatgcccacttaatgccagaaggttctcttggggagacagggcagctgaca
gtggcactggtgaggaaactggaagagaaacatcctaaggcttctgctcagaggtggtcc
ataaaacatgaagggactggtaagccaggccagtggaaacattccagagttgaaaatcct
ctctggaataagcttacttacatgtggccagtccttcccagcggtcaacttaatgaggag
tttgattggccaatagaaggactgcttcttccaaacagtcctcccatgaagaaacccatc
tgtaagacaccgaagcaatatgtccctgtgagactcagagttttgcagaatggagacaag
aacaaaaccagagcccttactataatcagtccaggcaaatcacctgagcagaaaatgcaa
aatgttgacactgaaaggaaaggaaatgttaaaaatgcttatgttactaaatattctgaa
acagaaacaaaccaggctggatttcaccaactcttggagaggtgcactgaaattttaaat
ttaccttctgcagctcggagattgttcaatgaaaaggggaaagaaatcttcaacttaaaa
gaccttcagagagatgagctggtgtatgtttcatgtggagaacattggatcaatcctgac
ctgtccattgctcagcaaaagaagcaaatcttcctgaggaacttagcatcagatatttct
aaaattcataccttctgcagtacacataaaatagaggctcttgttttagaagtccaaagt
gacattgtggcaggagccaagcttgctgtgcataaaccagttcctggagaagagaagcaa
attatagaaccagaggaaaagcaaatgcaaaaaaatgctttaacaacggaaaatgcttcc
agtgaaattctagattcacatgcaagagcccatctccgagtgaaggcttgtcacacactt
ctcaggtatgcctggcaggaaacttctcataactttgatgaggatgacagccttccaaag
aaaacggaagaagagctctttgaaaacatggaactagagaataaatacagccattctccc
aaacagagtaaactgcagaaacttcgccgccagcagtttgagtacagagatgggcaaatt
ataagctgcgctgctcctcagctagtcttgggggtgcaaagccccaaccctcattcaggc
acagaggtggttttggtggataaaaaagcagatgatagtcatcaacgctggttgcatgag
gaagacagcaggacctttcacctggtgagcaacccagaccttgtgctggctgtgtctatg
accaaggctagagatgatgcctgtggctatccagttattgctcagaaatataaaccatat
gacaatgggacttctaatcaaaagtggaattacctgaaaaataagaaagcttttatggcc
tttcatagcactgcaatggataaggaaatcacagcagcaaattatgctggtatttgtaca
tcctctgtgattaaagaagaaaacattgatcaaccaggatactactatgtctcacccaat
ggaaagagaaaaataatgctctgtttggcatgtggacaatccatgagagcagagaaggga
ctgaaacagttgcttccagggcagccattcctctgtgcctcaggctccaagacccagaag
cccttctcacggggacctttcaaggtcatcagtgtggccaaggctgatttatcttctgat
gaggctgaaaacactttaagttattatgaagagtgtctattatctttacggatgaagacc
tgctcacaagttgtatctcacagcagcatggcagttatacaccagaaggcagtgaaaata
attgcatacaaaaatggagatggatatcgaaatgggaagttaattgtggctggaacattc
cccatgcttcttacagaatgcacgcagcaacttggtcttgccagagcagcctccaaagta
tataccaaagatggaaccacaattctttccttgcgtgatttggttttatgggctttggat
gaatcttttattcagagagattctgaggaaaaaaagaaagagacagcccctgatggaaca
aaagagacacgtgttaaaaatatagaagtaaactcaagaatgaaaatgaaaaacaaatca
tttccaaagtctgtgacatctgatagcttggatggtatagataaatctttgctcaccctc
atcctcagaaatcctattgccatctgggtatcttgtggtgaaccatttctatctccaaat
gctttgcagagagcagaaaaaataggaaaacagaactggcaaaaaaaggacaaaattttg
gctgatctagacaccatgaaacacaaaatgagacagttaaaagggcgacgggtagcagca
tgtcagccaaccaccatggttcccaacaaaagccccttgcagccagtggtagtggaagga
ggctggactgagcagacgcaagaggaaattaaactcatggaccttataaggcatacagag
caggcatacttttctggagtccaagaattgcaatccaagagaaattctccaattgctcct
aaatgtagaacgctcaagaagagcagcctgtataagcaacccaatgcaaagcgagtatgg
gtttatctaaatggaggcagacctgaagatggcacctttgcccggggcaaaaccatttca
gagctgctagacgactgctcctcacggctcaaactggcccacccagccagaacactctac
acccctgagggagagccaattcactcgtgggacgacatagaaagagacatggtcatctgc
gtgaccacaggacatggctttattaccccaaaggagttaaagcaactggtggaggtcaga
gcaaattatgccagaatctgcaggcagcagggccctcaagccacagacattgtgttgtct
ccatctgcaaagctgcaatctctggcctccctgaaaaacactcgtgaacttccaagcaaa
gaactcctgatataa
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integrated database retrieval system
