Sus scrofa (pig): 100517041
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Entry
100517041 CDS
T01009
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100517041 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100517041 (DHX15)
03009 Ribosome biogenesis [BR:
ssc03009
]
100517041 (DHX15)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100517041 (DHX15)
Spliceosome [BR:
ssc03041
]
Complex A
U2 snRNP components
U2 related factors
100517041 (DHX15)
Complex B
100517041 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100517041 (DHX15)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
90S particles
Helicases
100517041 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
100517041
NCBI-ProteinID:
NP_001239141
Ensembl:
ENSSSCG00000008756
LinkDB
All DBs
Position
8:complement(18563808..18620892)
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSAHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRIRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIVSCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgacaccggttggacctgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaggatagagatcgtgaccgtgatcgtgaagatcggtctaaagataga
gaccgagaacgtgatagaggagatagagagcgggagagggagaaagaaaaggagaaggaa
ctgcgagcttcgacgaatgctatgctcatcagtgctggattaccacctttaaaagcttcc
cattcagctcactcaacccactcagcacattcagcacattcaacacattctgctcattca
acacacaccgggcatgcaggacacacatcacttccacagtgcattaatccatttaccaac
ttgccacatacccctcgatactatgatattctaaagaaacggcttcagctccctgtttgg
gaatacaaagatagatttacagatattctggttagacatcagtcctttgttcttgttggt
gagactgggtctggtaaaacaacacagattccacagtggtgtgtggagtacatgcgatca
ttaccaggacccaaaagaggagttgcctgtacccaacccaggagagtggctgcaatgagt
gtggctcagagagttgctgatgaaatggatgtgatgttgggccaggaagttggttactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatggcatg
ttacttcgtgaagctatgaatgatcctctcttggagcgttacggtgtaatcattcttgat
gaggctcatgaaaggacattggctacagatattctcatgggtgttctgaaggaagttgtt
agacagagatcagatttaaaggttatagttatgagtgctactctagatgcaggaaaattc
cagatttactttgataactgtcctctcttaactatccctgggcgtacacatcctgttgag
atcttttatactccggaaccagagagagattatctcgaagcagcaattcggacagtgatc
caaattcatatgtgtgaagaggaggagggagatcttctacttttcttaactggtcaagag
gaaattgatgaagcctgtaagagaataaagcgtgaggttgatgacttaggtcctgaagtt
ggtgacattaaaatcattccattgtactctacactcccacctcagcagcagcaacgcatt
tttgagcctccacctccaaaaaaacagaacggagcaattggaagaaaggtagttgtgtca
actaacattgcagagacatctttgacaatagatggtgtggtatttgtgattgatcctgga
tttgcaaaacaaaaggtgtacaatcctcgaatcagagtcgagtcccttttagtgacagcc
attagtaaagcttcagctcaacaaagggctggtcgagctggacgtatcagacctgggaaa
tgcttcagactctatacggagaaagcttacaaaacagaaatgcaggataatacctatcct
gagattttgcgttctaatttaggatcagttgtgctacagttgaagaaacttggtattgat
gatttggtacattttgattttatggacccaccagctcctgaaactctgatgagagcccta
gaactcttgaattatctggctgctttaaatgatgatggagatctgactgaattgggatcc
atgatggctgagtttcctctagatccacagctcgctaaaatggttattgtaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagccgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccatgcttttaaacaaaatcatgaatca
gttcagtggtgttatgacaacttcattaactacaggtccctgatgtcagcagacaatgta
cgccagcagctatcgagaattatggacagatttaatttgcctcgtcgaagtactgatttc
acaagcagggactattatattaatataagaaaagctttggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggttcag
ttgcatccctctactgttcttgaccacaagcctgaatgggtgctttataacgagtttgtt
ctcacaacgaagaattacatccggacatgtacagatatcaagcctgaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcatcattgccaaactgcaatccaaggaatattcacagtactga
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integrated database retrieval system
