Sus scrofa (pig): 100517063
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Entry
100517063 CDS
T01009
Symbol
GABRB2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04082
Neuroactive ligand signaling
ssc04723
Retrograde endocannabinoid signaling
ssc04726
Serotonergic synapse
ssc04727
GABAergic synapse
ssc05032
Morphine addiction
ssc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100517063 (GABRB2)
04082 Neuroactive ligand signaling
100517063 (GABRB2)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100517063 (GABRB2)
04726 Serotonergic synapse
100517063 (GABRB2)
04723 Retrograde endocannabinoid signaling
100517063 (GABRB2)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
100517063 (GABRB2)
05033 Nicotine addiction
100517063 (GABRB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100517063 (GABRB2)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
GABA-A
100517063 (GABRB2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
100517063
NCBI-ProteinID:
XP_003483903
UniProt:
A0A8D1UTI8
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Position
16:61984923..62240902
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AA seq
512 aa
AA seq
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MWRVRKKGYFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPV
AVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDT
YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIES
YGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKI
FYKDIKQNGTQYRSLWDPTGNLSPTRRTTNYDFSLYTMDPHENILLSTLEIKNEMATSEA
VMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPD
LTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtggagagtccggaaaaagggctactttgggatttggtcgtttcccttaataatcgct
gctgtctgtgcgcagagtgtcaatgaccctagtaatatgtcgctggttaaagagacggtg
gatagactcctgaaaggctatgatattcggctgagaccagattttggaggtccccccgtg
gctgtgggaatgaacattgacattgccagcatcgatatggtttctgaagtcaatatggat
tatacattgacaatgtactttcagcaagcgtggagagataagaggctgtcctataatgta
atacctttaaacttgactctggacaatagggtggcagaccagctctgggtgcccgacacc
tacttcctgaatgataagaagtcttttgtgcacggagtgaccgtcaagaaccgcatgatc
cgcctgcatccagatgggacggtcctgtacggcctcagaatcacaaccacagctgcctgc
atgatggacctaaggcggtacccactggatgaacaaaattgcaccctggaaattgaaagc
tatggatatacaactgatgacattgagttttactggcgtggggatgataatgcagtcaca
ggagtaacgaagattgaacttccacagttctctatcgtagactacaaacttatcaccaag
aaggtggttttctccacaggttcctatcccaggttgtccctcagctttaagcttaagaga
aacattggttacttcattctgcaaacatacatgccatctatcttgatcactatcctctcc
tgggtctccttctggattaattacgatgcttcagctgcaagagtggcattaggaattaca
actgtgctaaccatgaccacgatcaatacccaccttcgggagactctccctaaaatcccc
tatgtgaaggccattgacatgtacctgatggggtgctttgtctttgttttcatggccctt
ctggaatatgctttggtcaactatatcttctttgggaggggacctcaacgccaaaagaaa
gcagctgaaaaagctgctagtgccaacaatgagaagatgcgcctagatgtcaacaagatt
ttttataaagatattaaacaaaatgggacccaatatcgatccttgtgggacccaactgga
aacctctccccaactagacggactaccaattacgatttctctctgtatacgatggacccc
catgagaatattttactgagcactcttgagataaaaaatgaaatggccacgtctgaggct
gtgatgggacttggagaccccaggagcacaatgctggcctatgatgcctccagcatccag
tatcggaaagccgggttgcccaggcatagttttggccgaaatgctctggaacggcacgtg
gcacagaagaaaagccgcctgcggagacgtgcctcccagctgaaaatcaccatccccgac
ttgactgatgtgaatgccatagatcggtggtcccgcatattcttcccagtggttttttcc
ttcttcaacatcgtctattggctttattatgtgaactaa
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