Sus scrofa (pig): 100517115
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Entry
100517115 CDS
T01009
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100517115 (SOX21)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100517115 (SOX21)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100517115
NCBI-ProteinID:
XP_020921444
UniProt:
A0A4X1UZK9
F2Z520
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All DBs
Position
11:complement(63822110..63826498)
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AA seq
276 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADAEHPALKAGAGLHAG
AGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMA
EISSSSSGLPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNC
SAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggaccacgtcaagcggcccatgaatgccttcatggtgtggtcgcgg
gctcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaagctgctcaccgagtcagagaagcggccgttcatcgacgag
gcaaagcgcctgcgcgccatgcacatgaaggagcaccccgactacaagtaccggccgagg
cgcaagcccaagacgctgctcaaaaaggacaagttcgccttcccggtgccctacggcctg
ggcggcgtggccgacgccgagcacccggcgctcaaggcgggcgccgggctgcacgcgggc
gcgggcggtggcctggtgcccgagtcgctgctcgccaaccccgagaaggcggccgcggcc
gccgccgcggctgccgcgcgcgtcttcttcccgcagtcggccgctgccgctgccgccgcc
gccgccgccgccgccgccggcagcccttactctctgctcgacctgggctccaagatggca
gagatctcgtcgtcgtcgtccggcctcccgtacgcgtcgtcgctgggctacccgaccgcg
ggtgcgggcgccttccacggcgcggcggccgcggctgcagcggcggccgcggccgccggg
gggcacacgcactcgcaccccagcccgggcaacccgggctacatgatcccgtgcaactgc
agcgcgtggcccagccccgggctgcagccgccgctcgcctacatcctgctgccgggcatg
ggcaagcctcagctggacccctaccctgcggcctacgccgccgcgctatga
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