Sus scrofa (pig): 100517135
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Entry
100517135 CDS
T01009
Symbol
NUP62CL
Name
(RefSeq) nucleoporin-62 C-terminal-like protein isoform X2
KO
K14306
nuclear pore complex protein Nup62
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
ssc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100517135 (NUP62CL)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100517135 (NUP62CL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100517135 (NUP62CL)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100517135 (NUP62CL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nup188_C
Laminin_II
AJAP1_PANP_C
DUF4164
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
100517135
NCBI-ProteinID:
XP_005654342
Ensembl:
ENSSSCG00000012557
LinkDB
All DBs
Position
X:complement(87578656..87658296)
Genome browser
AA seq
306 aa
AA seq
DB search
MLFTSFSNASSSTAATGISFGSPTTSTGTLGGTTLGFGLKFPGAGGAMPVASTTTSTTTT
TTVTTTTTTTITSGFTLNIKPLTSTGIDNTVPVGITSIPFTSTVNAIITPVMTYGQLDGL
VNKWSLELEDQEKHFLHQATQVNVWDNTLIENGEKITALHGEVEKVKLDQKRLEKELDFI
LSQQKELEDLLIPLEESVKDQNGSVYLQHTDERESTYKLAENIDAQLKRMAQDLKDIIEH
LNTFGSPADTTEPLQQICKILNAHMDSLQWINQTSGMLQRKVEEVTQVFEHRRRQEQDRN
IRIAFD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttacctcattttcaaatgcttcatcctccactgctgctactgggatctcattt
ggttccccgacaacttcgactggaacacttggtggtacaactttgggatttggattaaaa
ttccctggagccggtggagcaatgcctgttgcatctactacaacatcaactaccactacc
accactgtcaccaccactaccaccactaccatcaccagtggatttaccttgaacataaaa
ccactgacatcaactgggattgataacactgttccagtcggcattacttctatacctttt
acttcgactgttaatgcaatcataactcctgtgatgacatatggtcagctggatggtctg
gtaaacaaatggagccttgagttagaggatcaagagaaacactttcttcaccaggccacc
caggtcaatgtttgggacaatactttgattgagaatggtgagaagattactgctttgcat
ggagaagtagaaaaagtgaaactggatcagaaaaggctggaaaaagaattggattttatc
ctgtcacagcagaaggaattggaagatctcttgatccctttggaggagtctgttaaggac
cagaatgggtctgtgtatctgcagcacacagatgagcgtgagagcacttacaagttagcc
gaaaatatagatgctcagctgaaacgaatggcacaagatctcaaggacattattgagcac
ctgaatacctttggaagtcctgctgacactactgagccgctccagcagatctgcaaaatt
ctgaatgctcatatggattctctgcaatggattaatcagacatcaggcatgctgcaaagg
aaggtagaagaggtaacacaggttttcgagcatcgtcgtcgccaggagcaagaccgcaat
atcaggattgcttttgattga
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