Sus scrofa (pig): 100517305
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Entry
100517305 CDS
T01009
Symbol
RNF43
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100517305 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100517305 (RNF43)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100517305 (RNF43)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100517305 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
100517305
NCBI-ProteinID:
XP_020922933
LinkDB
All DBs
Position
12:complement(34631574..34695021)
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AA seq
782 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGRPGLVLAAVESERSAEQKAIIRVIPLKMDPSGKL
NLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCLS
LASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNRK
AHVRIELKEPPTWPDYDVWILLTVVGTIFVVVLASVLRIRCRPRHSRPDPLQQRTAWAIS
QLATRRYRASCRRARAEWPDAGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRTCVDP
WLHQHRTCPLCMFNIVEGDSLSQPLGPSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLLGP
SRSAVARPTRPGSFLPSQEPSGGPRHHRPPRAAHPRAPGDQQRLAAAQHPYAQGWGLSRL
RCASQHPTACPPPPRRPRPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVVN
CTDVSLQGIHGSSSTFRSSLSSDFDPLVYCSPQGGTQGEETQPGVTSRPRSLDSVVPTGE
TQVSSHVHYHRHRHHHYKKRFQWHSRKSGPETGVPRSRPAIPRTQLQSEPPSPDQETARS
NPAAPSGQLPNAQRPRALTEPAPAPADASSXTPSPGSLFHLQKSSLPVRHPQRRRRGGPS
EPIPASRPQDVTAPPACQILPHYGPSLAYPWXPEGHPLIFGPPGLDXRLLPETPGPSYPS
SRPVWLCLTPRQPLGPHPSGEGPSEWSSGPPEGRPCPYPHCQVLPAQPGSEEELEELCEQ
AV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctacagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgcccaggactggtcctggcagcggtggagtctgaaagatca
gccgagcagaaagctattatcagagtgatccccttgaaaatggacccctcaggaaaactg
aatctcactttggaaggtgtgtttgctggtgttgctgaaataactccagcagaaggaaaa
ttaatgcagtcccaccccctgtacctgtgcaacgccagcgatgatgacaatctggagcct
ggattcatcagcatcgtcaagctggagagtccccagcgggccccccgcccctgcctgtca
ctggccagcaaggcccggatggcaggtgagcgaggagccagcgctgtcctctttgacatc
acagaggatcgagccgctgcggagcagctgcagcagcccctgggcctgacgtggccagtg
gtgttgatctggggcaacgatgctgagaagctgatggagtttgtgtacaagaacagaaag
gcccacgtgaggatagagctgaaggagcccccaacctggccagattatgatgtgtggatc
ctcctgacggtggtgggcaccatctttgtggtcgtcctggcctcggtgctgcgcatccgg
tgccgcccccgccacagcaggccggatccccttcagcagagaacagcctgggccatcagc
cagctggctaccaggaggtaccgggccagctgcaggagggcccgggctgagtggccagac
gcaggaagcagctgcagctcagcccctgtgtgcgccatctgccttgaggagttctcagag
ggccaggagctacgggtcatttcctgcctccacgagttccatcgcacatgtgtggacccc
tggctgcatcagcatcgcacttgccccctctgcatgttcaacatcgtagagggagattca
ctttctcagcccctgggaccctctcgatcttaccaggaaccaggccggagactccacctc
attcgccagcatcccggccacgcccactaccacctgcctgctgcctacctgttgggcccc
tcccggagtgcagtggctcggcccacgcggcctggttccttcctcccatcccaggagccc
agcgggggccctcggcaccaccgccccccgagagctgcacatccccgggctccaggcgac
cagcagcgcctggccgcggcccagcacccctatgcacagggctgggggctgagccgcctg
cgatgcgcttcgcagcaccccactgcttgcccgccacccccgcgccggcctaggcctcac
gacagcagcggctctggagaaagctactgcacagagcgcagcggctacctggcagacgga
ccggccagcgactccagttcggggccctgccatggctcttcgagtgactccgtggtcaac
tgcacggacgtcagcctgcagggcatccacggcagcagctctaccttccgcagctccctg
agcagtgactttgaccccctggtttactgcagcccccaaggagggacccagggcgaggag
actcagcctggcgtgacctctcggccccgttctttggactccgtggtgcccacaggagaa
acccaggtttccagccatgtccactaccatcgccaccggcaccaccactacaaaaagcgt
ttccagtggcacagcaggaagtctggcccagaaaccggagtcccccggtccaggcctgcc
attcctcggacacagctccagtcagagccgccttcacctgaccaggaaacagccagatcc
aacccagcggctccttcagggcagctccccaacgcacaacggcccagggccctcaccgag
ccagcccctgcaccagccgatgcctccagcnccacccccagtcccggcagcctcttccac
ttgcagaaatccagcctccctgtccgacacccacagaggagacggcgggggggtccctca
gagcccatcccagcctctcgaccccaggacgtgactgcacccccagcctgccagattctc
ccccattatggtcctagcctggcatacccttggntcccagagggccacccactgatcttc
ggacctccgggcctggacngaaggctgctaccagaaaccccaggccctagttaccccagc
tcacggccagtgtggttgtgtctgactccacgccagcccctaggaccacacccatctggg
gaggggccttctgaatggagttctggccccccagagggcaggccgtgcccttacccacac
tgccaggtgctgccagcccagcctggctcagaagaggagcttgaggagctgtgtgaacag
gccgtgtga
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