Sus scrofa (pig): 100517336
Help
Entry
100517336 CDS
T01009
Symbol
THUMPD2
Name
(RefSeq) THUMP domain-containing protein 2 isoform X3
KO
K28400
U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 [EC:2.1.1.-]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100517336 (THUMPD2)
Spliceosome [BR:
ssc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
100517336 (THUMPD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0020
Methyltransf_31
Methyltransf_25
Methyltransf_11
Ubie_methyltran
THUMP
MTS
Methyltransf_12
N6_Mtase
AviRa
CMAS
Methyltransf_15
RlmL_1st
NpmA
Methyltransf_8
Methyltransf_18
Methyltransf_4
Methyltransf_ANTKMT
Motif
Other DBs
NCBI-GeneID:
100517336
NCBI-ProteinID:
XP_003481278
Ensembl:
ENSSSCG00000008470
UniProt:
A0A287B0I2
LinkDB
All DBs
Position
3:100557168..100597664
Genome browser
AA seq
504 aa
AA seq
DB search
MAAVTEDLHFGPAAGTRFFCTASRGLEPFLLREVRTRLRATQVEYISGKVFFTTCCDLNM
LKRLKSAERLFLLIKKQFPFNVSSVSKGQIFNEMEKLINDDPENWLNTLSIWKNLLEFDA
KEEELSQKDVNSLKRKVGEDDNTIAKKVKTEQVQEIHENKECQREKQTEETLEQGNCITQ
REELQEEELQNDAVEAVDTPTKGKHLTFRVSCRCSGAIAKTFTTQEIGRVIGIALKKQFG
WKVDLRNPNLEIFIHLSDIYSVVGIPVFRVPLASRAYIKTAGLRSTIAWAMASLAEIKAG
AFVLDPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGASDNLKAAGLKDKIELLKGSVI
ELPLPSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSGDHLRRLKGC
EESSVSLCPKGSRTDEPGSEECLNPEEKAAVPEPAWSSLEASNQEHLDRMPPFGSLVPVE
CYKVSLGKPDAFIYKYKKSHSPGQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtgaccgaagatctccacttcgggcccgcagcgggcacccgcttcttctgc
accgcgagccgcggcctggagcccttcctgctgcgggaggtgcggacgcggctgagggcc
acgcaggttgaatatatttcaggaaaagtttttttcaccacctgttgtgacttgaatatg
ctgaaaagattaaaatctgctgaaagattatttttgctgattaaaaagcagtttccattt
aatgtttcttctgtaagtaaaggacaaatatttaatgaaatggaaaaacttataaacgat
gatcctgaaaattggttgaatactctttcaatctggaaaaatcttcttgaatttgatgca
aaagaggaagaactttctcaaaaagatgttaactcactaaaaagaaaagtgggagaagat
gataataccattgctaagaaagtaaaaacagaacaagtgcaggagatacacgagaataag
gaatgccagcgagaaaaacaaacagaagaaacactggagcaaggaaactgtatcactcaa
agagaagaacttcaagaagaagaacttcagaatgatgcagtggaagcggtcgatactcct
actaaagggaagcacttgactttcagagtttcttgtcgctgcagtggagccattgcaaag
accttcacgacacaggagataggaagagtaattggaattgctcttaagaaacagtttgga
tggaaagtagatttgaggaatccaaatttagagatctttatacatttaagtgacatttac
tctgtggtgggaattcctgttttcagggttcctttagccagcagagcttacatcaagaca
gctggactgagatccaccatagcatgggcaatggcgtctcttgcagaaattaaggctggt
gcatttgttttagatccaatgtgtggacttggaacaatacttttggaggctgcaaaagaa
tggccagatgtgtattatgtgggtgctgatgtcagtgactcacagttactaggtgcgtct
gacaatctgaaagctgcaggccttaaggataaaatcgagttacttaaaggctctgttata
gaattgccattaccttcagaaagtgttgatattattatttctgacattccatttgggaaa
aagtttaagttaggaaaagatatcaaaagcattctgcaagaaatggaaagagtgcttcat
gttggcgggaccatcgtgttgctgcttagtggagaccacctcaggcgccttaaaggttgt
gaagagagcagcgtctccttgtgtcccaagggcagccgcacagatgaacctggaagtgaa
gaatgcttgaatcctgaagagaaagctgccgtaccagagccagcatggtcttcacttgaa
gccagtaaccaggaacacttggacagaatgccaccctttggctctttagtgccagtggaa
tgctacaaagttagcctgggaaaaccagatgcattcatatacaaatataagaagtcgcac
tcccctgggcaatag
DBGET
integrated database retrieval system
