Sus scrofa (pig): 100517457
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Entry
100517457 CDS
T01009
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00310
Lysine degradation
ssc00514
Other types of O-glycan biosynthesis
ssc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100517457 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100517457 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
100517457 (COLGALT1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100517457 (COLGALT1)
Glycosyltransferases [BR:
ssc01003
]
O-Glycan biosynthesis
O-linked Gal type
100517457 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
100517457
NCBI-ProteinID:
XP_003123541
Ensembl:
ENSSSCG00000013883
UniProt:
A0A287AXP9
A0A4X1UDT4
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Position
2:complement(60138303..60166751)
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AA seq
623 aa
AA seq
DB search
MAAAPRVCRRHRQPLLALLLLLLLALSPPGGPPGAAAYFPEERWSPESPLQAPRVLIALL
ARNAAHALPSTLGALERLRHPRERTALWVATDHNSDNTSAVLREWLVAVKSLYHSVEWRP
AEEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNLILNPDTLSL
LIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRQGCFAVPMVHSTFL
IDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRSHS
SLQDEAESFMHVQLEVMVKHPPAEPSQFISVPTKKPDKMGFDEVFMINLKRRQDRRDRML
RALQEQEIESRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNI
WKEVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEHPEK
AVPRVRNLVEADYSYWTLAYVISLQGARKLLAARPLSKMLPVDEFLPVMFDKHPVSEYKA
HFSPRNLRAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMREQQA
LSREAKNSDVLQSPLDSAARDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccccacgcgtgtgccggcgacaccggcagccgctcctggcgctgctgctc
ctgctgctgttggcgctatcacctccggggggtccgccgggcgccgccgcctacttccca
gaggagcgctggagcccggagtcgccgctgcaggcgccgcgtgtgctcatcgcgctgctg
gcgcgcaacgcggcccacgcgttgccctccacgctgggggctctggagcggctgcggcac
ccgcgggagcgcacggcgctgtgggtagccacagaccacaactccgacaacacgtcagcc
gtgcttcgggaatggttggtggccgtgaaaagtttgtaccactctgtagagtggcggcca
gcagaggagcccaggtcctacccagacgaggagggccccaaacactggtctgactcacgc
tatgagcatgtcatgaagttgcgccaggcagccctgaaatcagcccgggacatgtgggct
gactacatcctgtttgtagatgcagacaacctgatcctcaaccctgacacgctgagcctg
ctcattgctgagaacaagacggtggtggcccccatgctggattcccgggccgcgtactcc
aacttctggtgtgggatgacttcccagggctactacaagcgcacgcctgcctacatcccc
atccgcaagcgggaccgccagggctgctttgcagtccccatggtgcactcgaccttcctg
atcgacctgcggaaggcggcatccaggaacttggcgttctaccctccccaccctgactac
acctggtccttcgatgacatcattgtttttgccttctcctgcaagcaggcagaagtccag
atgtatgtctgcaacaaggaggtatacggcttcctgccggtgccactgcggtcacacagc
agcctccaggacgaggctgagagcttcatgcacgtgcagctggaggtcatggtgaaacac
ccgccagcggagccctcgcagtttatctcggtccccacgaagaagccagacaagatgggc
tttgatgaggtcttcatgatcaatctgaagcggcgccaggaccggcgggatcgcatgctg
cgggcgctgcaggagcaggagatagagtcccggctggtggaggctgtggacggcaaagcc
atgaacacgagccaggtggaggcgctgggcatccagatgctgcctggctaccgggacccc
taccatggaaggcccctcaccaagggcgaactgggctgcttcctcagccactataacatc
tggaaggaggttgtggaccgtgggctgcagaaatcactcgtatttgaggacgacctgcgc
tttgagattttcttcaagaggcgcctgatgaaccttatgcgggatgtggagcgggagggc
ctggactgggacctcatctatgtgggccggaagcggatgcaggtggagcacccggagaag
gctgtgccccgtgtgaggaatctggtggaggccgactactcctactggacgctggcctac
gtgatctccctgcaaggcgcccgcaagctgctggccgcccggccgctctccaagatgctg
cccgtggatgagttcttgccggtcatgtttgacaagcacccagtgtcggagtacaaggcc
cacttctcaccccgaaacctgcgcgccttctccgtggagcccctgctcatctacccgacg
cactacacaggggacgacgggtacgtcagcgacacagagacctcggtcgtgtggaacaac
gagcacgtcaagaccgactgggaccgggccaaatcccagaagatgcgggagcagcaggcc
ttgagccgcgaggccaagaactcagacgtgcttcagtccccactggacagcgctgcccgg
gacgagctctga
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