Sus scrofa (pig): 100517563
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Entry
100517563 CDS
T01009
Symbol
TBPL1
Name
(RefSeq) TATA box-binding protein-like protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03022
Basal transcription factors
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05165
Human papillomavirus infection
ssc05166
Human T-cell leukemia virus 1 infection
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100517563 (TBPL1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100517563 (TBPL1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100517563 (TBPL1)
05165 Human papillomavirus infection
100517563 (TBPL1)
09164 Neurodegenerative disease
05016 Huntington disease
100517563 (TBPL1)
05017 Spinocerebellar ataxia
100517563 (TBPL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100517563 (TBPL1)
03021 Transcription machinery [BR:
ssc03021
]
100517563 (TBPL1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100517563 (TBPL1)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100517563 (TBPL1)
RNA polymerase III system
TFIIIB
100517563 (TBPL1)
RNA polymerase I system
SL1/TIF-1B
100517563 (TBPL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
100517563
NCBI-ProteinID:
XP_003121240
Ensembl:
ENSSSCG00000022387
UniProt:
I3LRL0
LinkDB
All DBs
Position
1:complement(29899956..29936773)
Genome browser
AA seq
186 aa
AA seq
DB search
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKIICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIYPFVFE
SRKEIL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagacagtgatgttgcattggacattctaattacaaatgtagtctgtgttttt
agaacaagatgccatttgaacttaaggaagattgctttggagggagcaaatgtcatttat
aagcgtgatgttggaaaagtattaatgaagcttagaaaacctagaattacagctacaatt
tggtcctcaggaaaaattatttgcactggagcaacaagtgaagaagaagctaaatttggt
gccagacgtttagcccgcagtctccagaaactaggatttcaggtaatatttacagatttt
aaggttgttaacgttttggcagtttgtaacatgccgtttgaaatccgtttgccggaattc
acaaagaacaatagacctcatgccagttatgaacctgagcttcatcctgctgtgtgctat
cggataaaatctctaagagctacattacagattttttcaacaggaagtatcacagtaaca
gggcccaatgtaaaggctgttgctactgctgtggaacagatttacccatttgtgtttgaa
agcaggaaagaaattttataa
DBGET
integrated database retrieval system
