Sus scrofa (pig): 100517643
Help
Entry
100517643 CDS
T01009
Symbol
SPNS1
Name
(RefSeq) protein spinster homolog 1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100517643 (SPNS1)
Transporters [BR:
ssc02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
100517643 (SPNS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
OATP
MFS_4
PTR2
Motif
Other DBs
NCBI-GeneID:
100517643
NCBI-ProteinID:
NP_001229949
Ensembl:
ENSSSCG00000007809
LinkDB
All DBs
Position
3:18629646..18638442
Genome browser
AA seq
528 aa
AA seq
DB search
MSGSDSTPFLSQADDTDDGPAPGIPGLPGPMGNPKSEDPEVLDREGLQRITGLSSGRSAL
IVAVLCYINLLNYMDRFTVAGVLPDIEQFFDIGDGSSGLIQTVFISSYMVLAPVFGYLGD
RYNRKYLMCGGIAFWSLVTLGSSFIPKERFWLLLLTRGLVGVGEASYSTIAPTLIADLFV
ADQRSRMLSVFYFAIPVGSGLGYIAGSKVKDVAGDWHWALRVTPGLGVLAVVLLFLVVRE
PPRGAVERHSDSPPLNPTSWWADLRALARNPSFILSSLGFTAVAFVTGSLALWAPAFLLR
PRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRRSNPRADPLVCA
AGLLGSAPFLFLSLASARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEA
FQIVLSHLLGDAGSPYLIGLISDRLRRGWPPSFLSEFRALQFSLMLCAFVGALGGAAFLG
TAVFIEGDRRRAQLHVQGLLFEAGPADDRIVVPQRGRSTRVPVSSVLI
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggtccgactccacgcccttcctcagccaggcggatgacacggatgacggaccg
gcgcccggcatcccgggcttgccggggcccatggggaacccgaagtccgaggatcccgag
gtcctggaccgggagggactgcagcgcatcacgggcttgtcttcaggccgctcggctctc
atagtggcggtgctgtgctatatcaacctcctcaactacatggaccgcttcaccgtggct
ggcgtccttccggacatcgagcagttcttcgacatcggagacggtagctccggcctcatt
cagaccgtgttcatctccagttacatggtgttggcacctgtgtttggctacctgggtgac
aggtacaatcggaagtatctcatgtgcgggggcattgccttctggtccttggtgacactg
gggtcatccttcatccccaaagagcgattctggctgctccttctgacccggggcctggtg
ggggttggggaggccagttactccaccatcgcgcccaccctcatcgctgacctcttcgtg
gcagaccagcggagtcggatgctcagcgtgttctactttgccatcccggtgggcagtggt
ctgggttacatcgcaggctccaaagtgaaagatgtggccggggactggcactgggctctg
agggtgactccaggtctaggagtgctggccgttgtactgctgttcctggtagtacgggag
ccaccaaggggagccgtggagcgccactcagactcaccacccctgaaccccacctcatgg
tgggcagatctgagggctctggccagaaatcctagtttcatcctgtcctccctcggcttc
actgctgtggcctttgttacgggctcgctggctctttgggctcctgctttcttgctgcgt
ccccgtgtggtcttgggtgagaccccaccctgccttcctggagactcctgctcttcctct
gacagtctcatcttcgggctcatcacctgcctcaccggggtcctgggtgtgggcctgggt
gtggagatcagccgccgcctccgccgctccaacccccgggctgacccgctggtttgtgct
gctggcctcctgggctccgcacccttcctcttcctgtcgcttgccagtgcccgtggtagc
atcgtggccacctatattttcatttttattggagagaccctgctgtccatgaactgggcc
atcgtggctgacattctgctgtacgtggtgatccccacacgacgctccactgccgaagcc
ttccagatcgtgctgtcccacctgctgggtgatgccgggagcccctacctcattggcttg
atctccgaccgcctccgccggggctggcccccctccttcttgtccgagttccgggccctg
cagttctcgctcatgctctgcgccttcgtgggggcgctgggcggcgccgccttcctgggc
accgccgtcttcattgagggcgaccgccggcgggcccagctgcacgtacagggtctgttg
tttgaggccgggcctgctgatgaccgaatcgtggtgccccagcgaggccgatccacccgg
gtccccgtgtccagtgtgctcatctga
DBGET
integrated database retrieval system
