KEGG   Sus scrofa (pig): 100517710
Entry
100517710         CDS       T01009                                 
Symbol
UBAP2L
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X11
  KO
K26545  ubiquitin-associated protein 2
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100517710 (UBAP2L)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100517710 (UBAP2L)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    100517710 (UBAP2L)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100517710 (UBAP2L)
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA_8 CUE Comm Methyltransf_32
Other DBs
NCBI-GeneID: 100517710
NCBI-ProteinID: XP_003125776
Ensembl: ENSSSCG00000006553 ENSSSCG00000025849
LinkDB
Position
4:complement(95471122..95519800)
AA seq 1104 aa
MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDI
TGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDGGQTESNEEG
KENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPAGRGTERGRRGRGRG
RGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTSAWRTA
TEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSS
NLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHNMVSMLGKGFGDVTEAKGGSTTGS
QFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKTPNDSTVHSPFTK
RQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQP
AQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSA
SSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTR
RYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETV
SAASLLTTTNQHSSSLGGLSHNEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLH
TSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSV
ATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFP
TPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNP
ALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGY
GSHGYNTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPIN
PATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMILCCQRQQEEQTGSGQRS
QTSSIPQKPQTNKSAYNSYSWGAN
NT seq 3315 nt   +upstreamnt  +downstreamnt
atgatgacgtcggtgggcactaaccgagcccggggaaactgggaacaacctcaaaaccaa
aaccagacacagcacaagcagcggccccaggccactgcggaacaaattcgacttgcacag
atgatttcggaccataatgatgctgactttgaggaaaaggtgaaacaattgattgatatc
acaggcaagaaccaggatgaatgtgtcattgctttgcatgactgcaacggagatgtcaac
agagccatcaatgtactgctggaaggaaacccagatacgcattcctgggagatggtcggg
aagaagaagggagtttcaggacagaaggacggtggccaaacggagtccaacgaggaaggc
aaagaaaatcgagaccgggacagagactacagccggcgacgtggtggaccaccaagacgg
ggaagaggtgccagccgtggacgagagtttcggggtcaggaaaatggattagatggcacg
aagagtggaggacctgctggaagaggcacagaaagaggcagaagaggtcgtggccgaggc
agaggtggctctggtaggcggggaggaaggttttctgctcaaggaatgggaacctttaac
ccagctgattatgcagagccggccaatactgacgataactatggcaataatagcggcaat
acatggaacaacactggccactttgaacctgatgatgggacaagtgcatggaggactgca
acagaggagtggggaactgaagattggaatgaagatctttctgagaccaagatcttcact
gcctctaatgtgtcttcagtacctctgcctgcggagaatgtgacaatcactgctggtcag
agaattgatcttgctgttctgttggggaagacaccatcttcaatggagaatgattcatct
aatctggatccatctcaggctccttctcttgcccagccgctggtgtttagtaactcgaag
cagagtgctatatcacagcctgcttcagggaacacattttctcatcacaatatggtgagc
atgttagggaaaggatttggtgatgtcactgaagctaaaggcggcagcaccacaggctcc
cagttcttggagcagttcaagactgctcaagccctggctcagttggcagctcagcattct
caatctggaaccaccaccacctcctcttgggacatgggatccaccacacagtccccgtcg
ctggtgcagtatgatttgaagaccccaaatgattcaacagtgcacagcccctttacaaag
cgccaggctttcacttcatcttcaactatgatggaggtgttcctgcaggagaagccacct
gcagtggctacctccacagctgcacctccaccgccctcttctcctctgccaagcaagtcc
acctcggctccacaaatgtctcctgggtcttcagacaaccagtcctccagccctcagccg
gctcagcaaaaactgaaacagcagaagaaaaaagcctccttgacgtctaagattcctgct
ctggctgtggagatgcctggctcagcagatatctcagggctaaacctgcagtttggagca
ttgcagtttgggtcagagcctgtcctttctgattatgagtccacccccaccacgagcgcc
tcttcaagccaggctccaagtagcctctataccagcacggccagtgaatcttcatctaca
atttcatctaaccagagtcaggagtctggttatcagagtggcccaattcagtcgacaacc
tatacctcccaaaataatgctcagggccctctatatgaacagagatccacacagactcgg
cggtaccccagctccatctcttcatcaccccaaaaggacctgactcaggcaaagaatggc
ttcagttctgtgcaggccacgcagttacagaccacgcaatctgttgaaggtgctacaggc
tctgcagtgaaatctgactcaccttccacttctagcatcccccctctcaatgaaacggta
tctgcagcttcgttactgacaacaaccaatcagcactcatcctccttgggtggcttgagc
cacaatgaggagattccaaatactaccaccacacaacacagcagcacgttatctactcag
cagaataccctttcatcatcaacatcttctgggcgcacttcgacatccactcttttgcac
acaagcgtggagagtgaggcgaatctccattcttcctccagcactttctccaccacatcc
agcacagtctctgcacctcccccagtggtcagtgtctcctccagtctcaatagtggcagt
agcctgggcctcagcctaggcagcaactctaccgtcacagcctccactcgaagctcagtt
gctacgacttcaggaaaagctcctcccaacctccctcctggggtcccgccgttgttgcct
aatccatatattatggctcctgggctgttacatgcctacccgccacaagtatatggttat
gatgacttgcagatgcttcagacaagatttccattggattactacagcatcccatttccc
acccccaccactccgctgactgggagggatggtagcctggccagcaacccttattctggt
gacctcacaaagtttggccgtggggatgcctcctccccagccccggccacaaccttggcc
caaccccaacagaaccagacgcagactcaccataccacgcagcagacattcctgaacccg
gcgctgcctcctggctacagttacaccagcctgccatactacacaggggttccgggcctc
cccagcaccttccagtatgggcctgctgtgttccctgtggctcctacctcttccaagcag
catggtgtgaatgtcagtgtgaatgcatcagccacccctttccaacagccaagtggatat
gggtctcatggatacaacactggtgtatcagtcacctccagtaacacaggcgtgccagac
atctcgggttctgtgtactccaaaacccagcagtcctttgagaaacaaggttttcattcc
ggtactcctgctgcctcgttcaacctgccttcagccctaggaagtggggggcccatcaat
ccggccacagctgctgcctacccacctgccccctttatgcacattctgaccccccatcag
cagccgcactcccagatccttcaccatcacctgcagcaggatggccagctaccatatttg
cagatgattctctgttgccagcgccagcaggaggagcagacgggcagcgggcaacgtagc
cagaccagctccatcccgcagaagccccagaccaacaagtctgcctacaacagctacagc
tggggggccaactga

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